RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NANOS2P60321 138 aaKnown RBP12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 SNRPD3P62318 126 aaKnown RBP12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 LRRC37A5PQ49AS3 106 aa12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 TMEM182Q6ZP80 229 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 HIGD1AQ9Y241 93 aa12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 ALG5Q9Y673 324 aa12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 DNAH10Q8IVF4 4471 aa12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 IGSF23A1L1A6 192 aa12.8□□□□□ -0.36
SHKBP1-203ENST00000594298 AGPAT2O15120 278 aa12.8□□□□□ -0.36
SHKBP1-203ENST00000594298 ID1P41134 155 aa12.8□□□□□ -0.36
SHKBP1-203ENST00000594298 GALR1P47211 349 aa12.8□□□□□ -0.36
SHKBP1-203ENST00000594298 H2BFSP57053 126 aa12.8□□□□□ -0.36
SHKBP1-203ENST00000594298 TCTAP57738 103 aa12.8□□□□□ -0.36
SHKBP1-203ENST00000594298 SAMD13Q5VXD3 122 aa12.8□□□□□ -0.36
SHKBP1-203ENST00000594298 PPP1R1CQ8WVI7 109 aa12.8□□□□□ -0.36
SHKBP1-203ENST00000594298 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
SHKBP1-203ENST00000594298 OR5G3P0C626 314 aa12.79□□□□□ -0.36
SHKBP1-203ENST00000594298 ZNF688P0C7X2 276 aa12.79□□□□□ -0.36
SHKBP1-203ENST00000594298 CAMLGP49069 296 aa12.79□□□□□ -0.36
SHKBP1-203ENST00000594298 RGS21Q2M5E4 152 aa12.79□□□□□ -0.36
SHKBP1-203ENST00000594298 FAM24BQ8N5W8 94 aa12.79□□□□□ -0.36
SHKBP1-203ENST00000594298 MED28Q9H204 178 aa12.79□□□□□ -0.36
SHKBP1-203ENST00000594298 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 MEOX2P50222 304 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 BAXQ07812 192 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 VWC2Q2TAL6 325 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 LEMD1Q68G75 181 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 Q6ZRG5 221 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 STHQ8IWL8 128 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 C2CD4CQ8TF44 421 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 ARL6Q9H0F7 186 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 SLC25A22Q9H936 323 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 OR5AC2Q9NZP5 309 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 DOK5Q9P104 306 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 WDR83OSQ9Y284 106 aa12.78□□□□□ -0.36
SHKBP1-203ENST00000594298 MPDU1O75352 247 aa12.77□□□□□ -0.37
SHKBP1-203ENST00000594298 MPC2O95563 127 aa12.77□□□□□ -0.37
SHKBP1-203ENST00000594298 PSMG4Q5JS54 123 aa12.77□□□□□ -0.37
SHKBP1-203ENST00000594298 MGST2Q99735 147 aa12.77□□□□□ -0.37
SHKBP1-203ENST00000594298 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
SHKBP1-203ENST00000594298 ELOA3CA0A087WX78 387 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 H0YIZ8 118 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 H3BRN7 92 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 PRR20EP86478 221 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 PRR20CP86479 221 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 PRR20DP86480 221 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 PRR20BP86481 221 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 PRR20AP86496 221 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 ARV1Q9H2C2 271 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 HRH4Q9H3N8 390 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 VPS13DQ5THJ4 4388 aa12.76□□□□□ -0.37
SHKBP1-203ENST00000594298 UBE2L5PA0A1B0GUS4 154 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 COX7A2P2O60397 106 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 PSMB3P49720 205 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 NHLH2Q02577 135 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 OR5C1Q8NGR4 320 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 CHAC2Q8WUX2 184 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 RSG1Q9BU20 258 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 SLC25A32Q9H2D1 315 aa12.75□□□□□ -0.37
SHKBP1-203ENST00000594298 C11orf94C9JXX5 98 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 ISLRO14498 428 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 DEFB4AO15263 64 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 FGF7P21781 194 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 RPL29P47914 159 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 TMEM41BQ5BJD5 291 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 Q8NAQ8 132 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 OR1L4Q8NGR5 311 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 THAP6Q8TBB0 222 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 ASB13Q8WXK3 278 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
SHKBP1-203ENST00000594298 ACTL10Q5JWF8 245 aa12.73□□□□□ -0.37
SHKBP1-203ENST00000594298 C10orf113Q5VZT2 155 aa12.73□□□□□ -0.37
SHKBP1-203ENST00000594298 MORN3Q6PF18 240 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-203ENST00000594298 PATE2Q6UY27 113 aa12.73□□□□□ -0.37
SHKBP1-203ENST00000594298 LINC00305Q7Z4B0 112 aa12.73□□□□□ -0.37
SHKBP1-203ENST00000594298 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
SHKBP1-203ENST00000594298 PFDN5Q99471 154 aa12.73□□□□□ -0.37
SHKBP1-203ENST00000594298 APLNQ9ULZ1 77 aa12.73□□□□□ -0.37
SHKBP1-203ENST00000594298 KNCNA6PVL3 124 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 GIG44P09565 113 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 SPP1P10451 314 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 CXCL3P19876 107 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 RPL12P30050 165 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 NUTF2P61970 127 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 FGL1Q08830 312 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 FCN2Q15485 313 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 SPATA31B1PQ5VZV4 182 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 TRPT1Q86TN4 253 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 ZNF709Q8N972 641 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 UHRF2Q96PU4 802 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 SLC39A9Q9NUM3 307 aa12.72□□□□□ -0.37
SHKBP1-203ENST00000594298 HECTD4Q9Y4D8 3996 aa12.71□□□□□ -0.37
SHKBP1-203ENST00000594298 IGLL5B9A064 214 aa12.71□□□□□ -0.37
SHKBP1-203ENST00000594298 SOCS3O14543 225 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms