RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CARHSP1Q9Y2V2 147 aaKnown RBP15.97■□□□□ 0.15
PNKP-203ENST00000593946 A0A1W2PRE2 83 aa15.96■□□□□ 0.15
PNKP-203ENST00000593946 MRPS12O15235 138 aaKnown RBP15.96■□□□□ 0.15
PNKP-203ENST00000593946 UNQ9165/PRO28630Q6UXU0 137 aa15.96■□□□□ 0.15
PNKP-203ENST00000593946 C2CD3Q4AC94 2353 aa15.95■□□□□ 0.14
PNKP-203ENST00000593946 TMEM250H0YL14 139 aa15.95■□□□□ 0.14
PNKP-203ENST00000593946 NBEAP1P0C6P0 100 aa15.95■□□□□ 0.14
PNKP-203ENST00000593946 CRYBB3P26998 211 aa15.95■□□□□ 0.14
PNKP-203ENST00000593946 CDX1P47902 265 aaPredicted RBP15.95■□□□□ 0.14
PNKP-203ENST00000593946 METTL26Q96S19 204 aa15.95■□□□□ 0.14
PNKP-203ENST00000593946 C20orf24Q9BUV8 137 aa15.95■□□□□ 0.14
PNKP-203ENST00000593946 PDE6DO43924 150 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 SOHLH1Q5JUK2 328 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 TMEM190Q8WZ59 177 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 U3KQE9 123 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 NIPBLQ6KC79 2804 aaeCLIP15.94■□□□□ 0.14
PNKP-203ENST00000593946 BUB3O43684 328 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 IGLC2P0DOY2 106 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 HIST1H1EP10412 219 aaKnown RBP15.94■□□□□ 0.14
PNKP-203ENST00000593946 FAM90A2PQ658T7 463 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 GPHB5Q86YW7 130 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 CCDC28AQ8IWP9 274 aa15.94■□□□□ 0.14
PNKP-203ENST00000593946 GGTLC3B5MD39 225 aa15.93■□□□□ 0.14
PNKP-203ENST00000593946 H3BQ15 152 aa15.93■□□□□ 0.14
PNKP-203ENST00000593946 ZNF207O43670 478 aaKnown RBP15.93■□□□□ 0.14
PNKP-203ENST00000593946 APOC3P02656 99 aa15.93■□□□□ 0.14
PNKP-203ENST00000593946 SNRPCP09234 159 aaKnown RBP15.93■□□□□ 0.14
PNKP-203ENST00000593946 NPPCP23582 126 aa15.93■□□□□ 0.14
PNKP-203ENST00000593946 CEBPGP53567 150 aa15.93■□□□□ 0.14
PNKP-203ENST00000593946 BLNKQ8WV28 456 aa15.93■□□□□ 0.14
PNKP-203ENST00000593946 ZNF586Q9NXT0 402 aa15.93■□□□□ 0.14
PNKP-203ENST00000593946 RPL7P18124 248 aaKnown RBP15.92■□□□□ 0.14
PNKP-203ENST00000593946 OR4F17Q8NGA8 305 aa15.92■□□□□ 0.14
PNKP-203ENST00000593946 C4orf3Q8WVX3 66 aa15.92■□□□□ 0.14
PNKP-203ENST00000593946 WFDC12Q8WWY7 111 aa15.92■□□□□ 0.14
PNKP-203ENST00000593946 NKX6-2Q9C056 277 aaPredicted RBP15.92■□□□□ 0.14
PNKP-203ENST00000593946 F6UZH7 168 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 APOHP02749 345 aaPredicted RBP15.91■□□□□ 0.14
PNKP-203ENST00000593946 C1orf194Q5T5A4 169 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 C18orf65Q6ZTR6 163 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 OR8I2Q8N0Y5 310 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 IGHV4OR15-8A0A075B7B6 117 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 A0A087WW49 117 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 GUCA2BQ16661 112 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 RPEL1Q2QD12 228 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 FAM106AQ4KMX7 169 aa15.91■□□□□ 0.14
PNKP-203ENST00000593946 TRBV19A0A075B6N1 114 aa15.9■□□□□ 0.14
PNKP-203ENST00000593946 MYCNOSP40205 109 aa15.9■□□□□ 0.14
PNKP-203ENST00000593946 SUMO1P63165 101 aaKnown RBP15.9■□□□□ 0.14
PNKP-203ENST00000593946 SRSF2Q01130 221 aaKnown RBP15.9■□□□□ 0.14
PNKP-203ENST00000593946 C11orf52Q96A22 123 aa15.9■□□□□ 0.14
PNKP-203ENST00000593946 RNF114Q9Y508 228 aa15.9■□□□□ 0.14
PNKP-203ENST00000593946 SCO2A0A1W2PP80 73 aa15.89■□□□□ 0.13
PNKP-203ENST00000593946 ZNF320A2RRD8 509 aa15.89■□□□□ 0.13
PNKP-203ENST00000593946 H3BTX0 84 aa15.89■□□□□ 0.13
PNKP-203ENST00000593946 PROK1P58294 105 aa15.89■□□□□ 0.13
PNKP-203ENST00000593946 RANP62826 216 aaKnown RBP15.89■□□□□ 0.13
PNKP-203ENST00000593946 KHDC1LQ5JSQ8 128 aa15.89■□□□□ 0.13
PNKP-203ENST00000593946 GPR82Q96P67 336 aa15.89■□□□□ 0.13
PNKP-203ENST00000593946 DAZ1Q9NQZ3 744 aaKnown RBP15.89■□□□□ 0.13
PNKP-203ENST00000593946 IGHV3-49A0A0A0MS15 119 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 NDUFB4O95168 129 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 SVBPQ8N300 66 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 C17orf77Q96MU5 243 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 ELOVL1Q9BW60 279 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 SMAD5-AS1Q9Y6J3 95 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 TEP1Q99973 2627 aaKnown RBP15.88■□□□□ 0.13
PNKP-203ENST00000593946 IGHV3OR16-13A0A075B7E8 117 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 IGHV3-74A0A0B4J1X5 117 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 IGHV3-66A0A0C4DH42 116 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 K7EMT4 169 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 CD28P10747 220 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 PDE6HQ13956 83 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 RPUSD4Q96CM3 377 aaKnown RBP15.88■□□□□ 0.13
PNKP-203ENST00000593946 PARLQ9H300 379 aa15.88■□□□□ 0.13
PNKP-203ENST00000593946 HOXD3P31249 432 aaPredicted RBP15.87■□□□□ 0.13
PNKP-203ENST00000593946 DEFB136Q30KP8 78 aa15.87■□□□□ 0.13
PNKP-203ENST00000593946 C16orf54Q6UWD8 224 aa15.87■□□□□ 0.13
PNKP-203ENST00000593946 REC114Q7Z4M0 266 aa15.87■□□□□ 0.13
PNKP-203ENST00000593946 KLHL30-AS1Q8NEE0 82 aa15.87■□□□□ 0.13
PNKP-203ENST00000593946 Q9H3A6 140 aa15.87■□□□□ 0.13
PNKP-203ENST00000593946 HAX1O00165 279 aa15.86■□□□□ 0.13
PNKP-203ENST00000593946 LGALS9O00182 355 aa15.86■□□□□ 0.13
PNKP-203ENST00000593946 TM4SF20Q53R12 229 aa15.86■□□□□ 0.13
PNKP-203ENST00000593946 GLMPQ8WWB7 406 aa15.86■□□□□ 0.13
PNKP-203ENST00000593946 UFC1Q9Y3C8 167 aa15.86■□□□□ 0.13
PNKP-203ENST00000593946 MAST4O15021 2626 aa15.86■□□□□ 0.13
PNKP-203ENST00000593946 A0A087X0K7 114 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 IGHV7-4-1A0A0J9YVY3 117 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 A8MWP6 167 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 SLC17A3O00476 420 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 GALR1P47211 349 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 FAM74A3Q4VXF1 159 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 HIST2H2BDQ6DRA6 164 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 LYPD1Q8N2G4 141 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 C11orf44Q8N8P7 122 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 SMIM7Q9BQ49 75 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 TCEAL7Q9BRU2 100 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 NIPSNAP3BQ9BS92 247 aa15.85■□□□□ 0.13
PNKP-203ENST00000593946 DERL1Q9BUN8 251 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms