RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 JOSD1Q15040 202 aaPredicted RBP15.4■□□□□ 0.06
CLIP3-206ENST00000593074 Q86TA4 180 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 TMEM256Q8N2U0 113 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 TXN2Q99757 166 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 ZNF492Q9P255 531 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 ABCA2Q9BZC7 2435 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 GRIFINA4D1Z8 144 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 CRISP2P16562 243 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 SIGLEC15Q6ZMC9 328 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 OR5R1Q8NH85 324 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 CMTM2Q8TAZ6 248 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 TSKUQ8WUA8 353 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 NAT8BQ9UHF3 227 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 TP53TG3Q9ULZ0 132 aa15.4■□□□□ 0.06
CLIP3-206ENST00000593074 CSMD1Q96PZ7 3565 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 COL12A1Q99715 3063 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 IGHV1-69DA0A0B4J2H0 117 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 TRBV6-1A0A0K0K1D8 114 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 LINC00587B1AMM8 73 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 ATP6V0E1O15342 81 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 SCGB2A1O75556 95 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 IGLV2-11P01706 119 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 IGHV1-69P01742 117 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 DSCR9P59020 149 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 SRSF1Q07955 248 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLIP3-206ENST00000593074 MRPL54Q6P161 138 aaKnown RBP15.39■□□□□ 0.05
CLIP3-206ENST00000593074 RASL11AQ6T310 242 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 BCL6BQ8N143 479 aaPredicted RBP15.39■□□□□ 0.05
CLIP3-206ENST00000593074 VN1R17PQ8TDU5 208 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 WIPF2Q8TF74 440 aaPredicted RBP15.39■□□□□ 0.05
CLIP3-206ENST00000593074 FBXL7Q9UJT9 491 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 OR2T8A6NH00 312 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 HLA-DQA1P01909 254 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 C17orf77Q96MU5 243 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 PRSS22Q9GZN4 317 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 PRDM13Q9H4Q3 707 aa15.39■□□□□ 0.05
CLIP3-206ENST00000593074 IGHV3OR16-10A0A075B7F0 116 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 C19orf71A6NCJ1 209 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 IGHV3-23P01764 117 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 CTSGP08311 255 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 Q0VG73 95 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 CT83Q5H943 113 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 UNQ5815/PRO19632Q6UWF5 114 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 NRGNQ92686 78 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 ZNF414Q96IQ9 312 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 TMUB1Q9BVT8 246 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 ZFYVE26Q68DK2 2539 aa15.38■□□□□ 0.05
CLIP3-206ENST00000593074 GZMBP10144 247 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 ESDP10768 282 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 LINC00310P59036 64 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 PDE6HQ13956 83 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 LINC00322Q6ZN03 302 aaPredicted RBP15.37■□□□□ 0.05
CLIP3-206ENST00000593074 GOLT1AQ6ZVE7 132 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 NUP35Q8NFH5 326 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 SVEP1Q4LDE5 3571 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 NUPR1O60356 82 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 PAX1P15863 534 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 ECSCRQ19T08 205 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 C5orf56Q8N8D9 126 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 NEU1Q99519 415 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 RPP21Q9H633 154 aaKnown RBP15.37■□□□□ 0.05
CLIP3-206ENST00000593074 MYO18BQ8IUG5 2567 aa15.37■□□□□ 0.05
CLIP3-206ENST00000593074 ZNF462Q96JM2 2506 aa15.36■□□□□ 0.05
CLIP3-206ENST00000593074 TRAV8-1A0A0A6YYK1 113 aa15.36■□□□□ 0.05
CLIP3-206ENST00000593074 MSMBP08118 114 aa15.36■□□□□ 0.05
CLIP3-206ENST00000593074 TMEM75Q8N9X5 138 aa15.36■□□□□ 0.05
CLIP3-206ENST00000593074 ZNF502Q8TBZ5 544 aa15.36■□□□□ 0.05
CLIP3-206ENST00000593074 ZNF331Q9NQX6 463 aaPredicted RBP15.36■□□□□ 0.05
CLIP3-206ENST00000593074 TRAV40A0A0B4J280 105 aa15.35■□□□□ 0.05
CLIP3-206ENST00000593074 A1L4Q6 167 aa15.35■□□□□ 0.05
CLIP3-206ENST00000593074 HIGD1CA8MV81 97 aa15.35■□□□□ 0.05
CLIP3-206ENST00000593074 RAB4BP61018 213 aa15.35■□□□□ 0.05
CLIP3-206ENST00000593074 C15orf32Q32M92 178 aa15.35■□□□□ 0.05
CLIP3-206ENST00000593074 NPIPB6E9PJ23 425 aa15.34■□□□□ 0.05
CLIP3-206ENST00000593074 P01737 135 aa15.34■□□□□ 0.05
CLIP3-206ENST00000593074 BRD3OSQ6XYD6 125 aa15.34■□□□□ 0.05
CLIP3-206ENST00000593074 ATP5L2Q7Z4Y8 100 aa15.34■□□□□ 0.05
CLIP3-206ENST00000593074 SERF1AO75920 110 aa15.34■□□□□ 0.05
CLIP3-206ENST00000593074 RHOGP84095 191 aa15.34■□□□□ 0.05
CLIP3-206ENST00000593074 BMPR1BO00238 502 aa15.33■□□□□ 0.04
CLIP3-206ENST00000593074 OR10J3Q5JRS4 329 aa15.33■□□□□ 0.04
CLIP3-206ENST00000593074 PRNTQ86SH4 94 aa15.33■□□□□ 0.04
CLIP3-206ENST00000593074 MEGF9Q9H1U4 602 aa15.33■□□□□ 0.04
CLIP3-206ENST00000593074 GNB4Q9HAV0 340 aa15.33■□□□□ 0.04
CLIP3-206ENST00000593074 MOB4Q9Y3A3 225 aa15.33■□□□□ 0.04
CLIP3-206ENST00000593074 A8MWL6 223 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 B4DSR2 109 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 K7EQM0 130 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 RPL7P18124 248 aaKnown RBP15.32■□□□□ 0.04
CLIP3-206ENST00000593074 CTAG1AP78358 180 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 PIFOQ8TCI5 191 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 RABAC1Q9UI14 185 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 A0A1B0GXF2 115 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 LINC01548A6NM66 108 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 DIRC3C9JPN6 131 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 G3V318 75 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 APCSP02743 223 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 SLC25A16P16260 332 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 PSG3Q16557 428 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 CIARTQ8N365 385 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms