RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 MAP1AP78559 2803 aaPredicted RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 DOCK11Q5JSL3 2073 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 IGHV3-72A0A0B4J1Y9 119 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 IGHV2-70DA0A0C4DH43 119 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 TRBV6-1A0A0K0K1D8 114 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 SMIM27A0A1W2PRY6 76 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 ODF3BA8MYP8 253 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 TEX22C9J3V5 150 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 J3QLI3 93 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 K7EN84 100 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 PEX7O00628 323 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 TIMM23O14925 209 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 NBR2O15453 112 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 NDUFA3O95167 84 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 NBEAP1P0C6P0 100 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 HIST1H1EP10412 219 aaKnown RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 GATA2P23769 480 aaPredicted RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 COX7A1P24310 79 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 ZFP36P26651 326 aaKnown RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 MYCNOSP40205 109 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 JOSD1Q15040 202 aaPredicted RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 TMEM183BQ1AE95 376 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 PYY3Q5JQD4 70 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 C10orf55Q5SWW7 151 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 HCP5Q6MZN7 132 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 PATE2Q6UY27 113 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 ZNF329Q86UD4 541 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 LYPD1Q8N2G4 141 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 TEX29Q8N6K0 151 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 C5orf17Q8NAS9 161 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 OR1B1Q8NGR6 318 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 SRSF12Q8WXF0 261 aaKnown RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 FXYD5Q96DB9 178 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 FMC1Q96HJ9 113 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 RITA1Q96K30 269 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 IGF2BP2-AS1Q96M15 143 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 ZNF48Q96MX3 618 aaPredicted RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 RASL11BQ9BPW5 248 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 AURKAIP1Q9NWT8 199 aaPredicted RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 C1RLQ9NZP8 487 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 FAM30AQ9NZY2 134 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 THYN1Q9P016 225 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 EPDR1Q9UM22 224 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 HIGD1AQ9Y241 93 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 TBL2Q9Y4P3 447 aaKnown RBP4.54□□□□□ -1.68
SDF2-206ENST00000587788 ZANQ9Y493 2812 aa4.54□□□□□ -1.68
SDF2-206ENST00000587788 TET2Q6N021 2002 aaPredicted RBP4.53□□□□□ -1.68
SDF2-206ENST00000587788 ANK3Q12955 4377 aaKnown RBP4.53□□□□□ -1.68
SDF2-206ENST00000587788 TRAV5A0A0B4J249 113 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 IGHV4-61A0A0C4DH41 118 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 IZUMO1RA6ND01 250 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 PGPEP1LA6NFU8 196 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 NPIPB5A8MRT5 1133 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 TSTD3H0UI37 97 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 I3L2K1 104 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 FCN1O00602 326 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 HLA-DQA1P01909 254 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 AMBPP02760 352 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 MSMBP08118 114 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 IGLC1P0CG04 106 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 RD3LP0DJH9 198 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 ESDP10768 282 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 ORM2P19652 201 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 BRS3P32247 399 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 MFAP2P55001 183 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 PKIAP61925 76 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 UBE2G1P62253 170 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 RANP62826 216 aaKnown RBP4.53□□□□□ -1.68
SDF2-206ENST00000587788 Q0VG73 95 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 EBI3Q14213 229 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 MMDQ15546 238 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 ZNF124Q15973 351 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 IBA57Q5T440 356 aaKnown RBP4.53□□□□□ -1.68
SDF2-206ENST00000587788 GFI1BQ5VTD9 330 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 ZNF562Q6V9R5 426 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 BAGE2Q86Y30 109 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 GBGT1Q8N5D6 347 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 ARL6IP6Q8N6S5 226 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 WIPF2Q8TF74 440 aaPredicted RBP4.53□□□□□ -1.68
SDF2-206ENST00000587788 GRAMD2BQ96HH9 432 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 TXN2Q99757 166 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 ATG101Q9BSB4 218 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 SIRPDQ9H106 197 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 FBXL15Q9H469 300 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 OTORQ9NRC9 128 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 SOX21Q9Y651 276 aaPredicted RBP4.53□□□□□ -1.68
SDF2-206ENST00000587788 ABCA1O95477 2261 aa4.53□□□□□ -1.68
SDF2-206ENST00000587788 FN1P02751 2386 aaKnown RBP4.52□□□□□ -1.69
SDF2-206ENST00000587788 SERTM2A0A1B0GWG4 89 aa4.52□□□□□ -1.69
SDF2-206ENST00000587788 FAM231BA6NCW3 169 aa4.52□□□□□ -1.69
SDF2-206ENST00000587788 PGPA6NDG6 321 aa4.52□□□□□ -1.69
SDF2-206ENST00000587788 FBLL1A6NHQ2 334 aaKnown RBP4.52□□□□□ -1.69
SDF2-206ENST00000587788 ZNF705GA8MUZ8 300 aaPredicted RBP4.52□□□□□ -1.69
SDF2-206ENST00000587788 B5MCH6 92 aa4.52□□□□□ -1.69
SDF2-206ENST00000587788 INAFM1C9JVW0 142 aa4.52□□□□□ -1.69
SDF2-206ENST00000587788 K7EQM0 130 aa4.52□□□□□ -1.69
SDF2-206ENST00000587788 SLC17A3O00476 420 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms