RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 TRAV2A0A0B4J234 112 aa9.35□□□□□ -0.91
RETREG3-203ENST00000585894 RPL29P47914 159 aaKnown RBP9.35□□□□□ -0.91
RETREG3-203ENST00000585894 DEFB1P60022 68 aa9.35□□□□□ -0.91
RETREG3-203ENST00000585894 HAGHQ16775 308 aa9.35□□□□□ -0.91
RETREG3-203ENST00000585894 LINC00322Q6ZN03 302 aaPredicted RBP9.35□□□□□ -0.91
RETREG3-203ENST00000585894 Q6ZNX1 250 aa9.35□□□□□ -0.91
RETREG3-203ENST00000585894 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
RETREG3-203ENST00000585894 TRAV5A0A0B4J249 113 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 MPDU1O75352 247 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 RPL35AP18077 110 aaKnown RBP9.34□□□□□ -0.91
RETREG3-203ENST00000585894 AP2S1P53680 142 aaPredicted RBP9.34□□□□□ -0.91
RETREG3-203ENST00000585894 PSMG4Q5JS54 123 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 C10orf113Q5VZT2 155 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 Q6ZRG5 221 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 AQP10Q96PS8 301 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 RETNQ9HD89 108 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 STAB2Q8WWQ8 2551 aa9.34□□□□□ -0.91
RETREG3-203ENST00000585894 KNCNA6PVL3 124 aa9.34□□□□□ -0.92
RETREG3-203ENST00000585894 SOCS3O14543 225 aa9.34□□□□□ -0.92
RETREG3-203ENST00000585894 PXDC1Q5TGL8 231 aa9.34□□□□□ -0.92
RETREG3-203ENST00000585894 IGFL4Q6B9Z1 124 aa9.34□□□□□ -0.92
RETREG3-203ENST00000585894 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.34□□□□□ -0.92
RETREG3-203ENST00000585894 DNAJC4Q9NNZ3 241 aa9.34□□□□□ -0.92
RETREG3-203ENST00000585894 TNFSF18Q9UNG2 199 aa9.34□□□□□ -0.92
RETREG3-203ENST00000585894 H3BTX0 84 aa9.33□□□□□ -0.92
RETREG3-203ENST00000585894 ARPC5O15511 151 aa9.33□□□□□ -0.92
RETREG3-203ENST00000585894 IFNA5P01569 189 aa9.33□□□□□ -0.92
RETREG3-203ENST00000585894 PRB4P10163 310 aaPredicted RBP9.33□□□□□ -0.92
RETREG3-203ENST00000585894 GALR1P47211 349 aa9.33□□□□□ -0.92
RETREG3-203ENST00000585894 SPATA31B1PQ5VZV4 182 aa9.33□□□□□ -0.92
RETREG3-203ENST00000585894 FAM110AQ9BQ89 295 aa9.33□□□□□ -0.92
RETREG3-203ENST00000585894 ELOA3CA0A087WX78 387 aaPredicted RBP9.32□□□□□ -0.92
RETREG3-203ENST00000585894 LOC102724200A0A096LPH7 203 aaPredicted RBP9.32□□□□□ -0.92
RETREG3-203ENST00000585894 MRPS12O15235 138 aaKnown RBP9.32□□□□□ -0.92
RETREG3-203ENST00000585894 ZNF709Q8N972 641 aa9.32□□□□□ -0.92
RETREG3-203ENST00000585894 INO80EQ8NBZ0 244 aaPredicted RBP9.32□□□□□ -0.92
RETREG3-203ENST00000585894 OR11H4Q8NGC9 324 aa9.32□□□□□ -0.92
RETREG3-203ENST00000585894 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
RETREG3-203ENST00000585894 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
RETREG3-203ENST00000585894 LINC00052Q96N35 136 aa9.32□□□□□ -0.92
RETREG3-203ENST00000585894 EIF3GO75821 320 aaKnown RBP eCLIP9.31□□□□□ -0.92
RETREG3-203ENST00000585894 ATF4P18848 351 aaPredicted RBP9.31□□□□□ -0.92
RETREG3-203ENST00000585894 ACTL10Q5JWF8 245 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 FFAR4Q5NUL3 377 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 RNF182Q8N6D2 247 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 HSD17B11Q8NBQ5 300 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 OR1L4Q8NGR5 311 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 C17orf112F2Z3M2 114 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 RPL7P18124 248 aaKnown RBP9.31□□□□□ -0.92
RETREG3-203ENST00000585894 HLA-DMBP28068 263 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 S100A7P31151 101 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
RETREG3-203ENST00000585894 SNRPD3P62318 126 aaKnown RBP9.31□□□□□ -0.92
RETREG3-203ENST00000585894 MIR17HGQ75NE6 70 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 C16orf92Q96LL3 132 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 GPR82Q96P67 336 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 PFDN5Q99471 154 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 TM2D3Q9BRN9 247 aa9.31□□□□□ -0.92
RETREG3-203ENST00000585894 SEPSECSQ9HD40 501 aaKnown RBP9.31□□□□□ -0.92
RETREG3-203ENST00000585894 TRAV8-2A0A0B4J237 113 aa9.3□□□□□ -0.92
RETREG3-203ENST00000585894 A0A1B0GVG6 124 aa9.3□□□□□ -0.92
RETREG3-203ENST00000585894 F6UB75 175 aa9.3□□□□□ -0.92
RETREG3-203ENST00000585894 GDF5OSQ5U4N7 250 aa9.3□□□□□ -0.92
RETREG3-203ENST00000585894 FAM78BQ5VT40 261 aa9.3□□□□□ -0.92
RETREG3-203ENST00000585894 RPL7L1Q6DKI1 246 aaKnown RBP9.3□□□□□ -0.92
RETREG3-203ENST00000585894 GATAD1Q8WUU5 269 aa9.3□□□□□ -0.92
RETREG3-203ENST00000585894 ST6GAL2Q96JF0 529 aa9.3□□□□□ -0.92
RETREG3-203ENST00000585894 H3BQ15 152 aa9.29□□□□□ -0.92
RETREG3-203ENST00000585894 SLC17A3O00476 420 aa9.29□□□□□ -0.92
RETREG3-203ENST00000585894 PYYP10082 97 aa9.29□□□□□ -0.92
RETREG3-203ENST00000585894 PSMB3P49720 205 aa9.29□□□□□ -0.92
RETREG3-203ENST00000585894 S100A7AQ86SG5 101 aa9.29□□□□□ -0.92
RETREG3-203ENST00000585894 PARD6GQ9BYG4 376 aaPredicted RBP9.29□□□□□ -0.92
RETREG3-203ENST00000585894 MFFQ9GZY8 342 aa9.29□□□□□ -0.92
RETREG3-203ENST00000585894 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
RETREG3-203ENST00000585894 KCNIP2Q9NS61 270 aa9.29□□□□□ -0.92
RETREG3-203ENST00000585894 HUWE1Q7Z6Z7 4374 aaKnown RBP9.29□□□□□ -0.92
RETREG3-203ENST00000585894 A0A087X0K7 114 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 ISLRO14498 428 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 NHLRC4P0CG21 123 aaPredicted RBP9.28□□□□□ -0.92
RETREG3-203ENST00000585894 ID1P41134 155 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 BPIFA4PQ86YQ2 179 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 STHQ8IWL8 128 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 RCHY1Q96PM5 261 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 IGKV3-20P01619 116 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 IGLC2P0DOY2 106 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 ATP6V0CP27449 155 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 MEOX2P50222 304 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 RAB2AP61019 212 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 CD300CQ08708 224 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 ZNF266Q14584 549 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 TRPT1Q86TN4 253 aaKnown RBP9.28□□□□□ -0.92
RETREG3-203ENST00000585894 FAM167A-AS1Q96KT0 104 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 ZMAT4Q9H898 229 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 U3KQK5 164 aa9.28□□□□□ -0.92
RETREG3-203ENST00000585894 ZNF705DP0CH99 300 aaPredicted RBP9.27□□□□□ -0.93
RETREG3-203ENST00000585894 ZNF705BP0CI00 300 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms