RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 FAM24AA6NFZ4 105 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 RTL8CO15255 209 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 TOMM40O96008 361 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 CFDP00746 253 aaPredicted RBP9.78□□□□□ -0.84
SS18-222ENST00000582792 P0DMU3 169 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 FAM231AP0DMU4 169 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 FAM231CP0DMU5 169 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 S100A11P31949 105 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 RAP2BP61225 183 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 HBG1P69891 147 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 HBG2P69892 147 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 BAXQ07812 192 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 TIGITQ495A1 244 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 OR8G2PQ6IF36 304 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 STX12Q86Y82 276 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 Q8WTZ3 238 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 NPVFQ9HCQ7 196 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 OR5AC2Q9NZP5 309 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 IGKV1D-37A0A075B6S9 117 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 DEFB131BA0A096LNP1 70 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 IGSF23A1L1A6 192 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 ZFP92A6NM28 416 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 KNCNA6PVL3 124 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 CCNKO75909 580 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 NPPCP23582 126 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 ARL16Q0P5N6 197 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 LRRC37A5PQ49AS3 106 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 Q6ZNX1 250 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 STXBP6Q8NFX7 210 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 CLEC5AQ9NY25 188 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 CELA1Q9UNI1 258 aa9.77□□□□□ -0.85
SS18-222ENST00000582792 ZNF688P0C7X2 276 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 RD3LP0DJH9 198 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 AKR1C1Q04828 323 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 SLC38A11Q08AI6 406 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 C12orf74Q32Q52 190 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 ACTL10Q5JWF8 245 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 THAP6Q8TBB0 222 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 DCANP1Q8TF63 244 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 NDUFAF3Q9BU61 184 aa9.76□□□□□ -0.85
SS18-222ENST00000582792 IGKV1OR2-108A0A075B7D4 117 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 M0R2N4 97 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 CST7O76096 145 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 PSG1P11464 419 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 CRYBB3P26998 211 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 SELENOTP62341 195 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 LGALS9BQ3B8N2 356 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 TEPPQ6URK8 271 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 ZNF767PQ75MW2 155 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 OR51G1Q8NGK1 321 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 METTL26Q96S19 204 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 TMEM147Q9BVK8 224 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 MBD2Q9UBB5 411 aa9.75□□□□□ -0.85
SS18-222ENST00000582792 NUP62P37198 522 aaPredicted RBP9.74□□□□□ -0.85
SS18-222ENST00000582792 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
SS18-222ENST00000582792 NARS2Q96I59 477 aaKnown RBP9.74□□□□□ -0.85
SS18-222ENST00000582792 SCRT1Q9BWW7 348 aa9.74□□□□□ -0.85
SS18-222ENST00000582792 UQCC1Q9NVA1 299 aa9.74□□□□□ -0.85
SS18-222ENST00000582792 SLC45A2Q9UMX9 530 aa9.74□□□□□ -0.85
SS18-222ENST00000582792 HSPB11Q9Y547 144 aa9.74□□□□□ -0.85
SS18-222ENST00000582792 U3KQE9 123 aa9.74□□□□□ -0.85
SS18-222ENST00000582792 SMCO3A2RU48 225 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 MPDU1O75352 247 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 RPL12P30050 165 aaKnown RBP9.73□□□□□ -0.85
SS18-222ENST00000582792 S100A7P31151 101 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 ZNF90Q03938 601 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 RAB31Q13636 194 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 CYP2G1PQ6ZSU1 146 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 BPIFCQ8NFQ6 507 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 WDR83OSQ9Y284 106 aa9.73□□□□□ -0.85
SS18-222ENST00000582792 IL4P05112 153 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 HNRNPCP07910 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
SS18-222ENST00000582792 PLP1P60201 277 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 NHLH2Q02577 135 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 PXDC1Q5TGL8 231 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 ZNF546Q86UE3 836 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 OR5C1Q8NGR4 320 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 OR2T35Q8NGX2 323 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 RNF125Q96EQ8 232 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 AQP10Q96PS8 301 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 C1QTNF4Q9BXJ3 329 aa9.72□□□□□ -0.85
SS18-222ENST00000582792 HELTA6NFD8 242 aa9.71□□□□□ -0.86
SS18-222ENST00000582792 EIF2B2P49770 351 aaKnown RBP9.71□□□□□ -0.86
SS18-222ENST00000582792 NUTF2P61970 127 aaKnown RBP9.71□□□□□ -0.86
SS18-222ENST00000582792 USF2Q15853 346 aaPredicted RBP9.71□□□□□ -0.86
SS18-222ENST00000582792 PSMG4Q5JS54 123 aa9.71□□□□□ -0.86
SS18-222ENST00000582792 S100A7AQ86SG5 101 aa9.71□□□□□ -0.86
SS18-222ENST00000582792 PARD6GQ9BYG4 376 aaPredicted RBP9.71□□□□□ -0.86
SS18-222ENST00000582792 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.86
SS18-222ENST00000582792 HSPG2P98160 4391 aa9.7□□□□□ -0.86
SS18-222ENST00000582792 G3V3Q6 166 aa9.7□□□□□ -0.86
SS18-222ENST00000582792 AGPAT2O15120 278 aa9.7□□□□□ -0.86
SS18-222ENST00000582792 Q5BKY6 102 aa9.7□□□□□ -0.86
SS18-222ENST00000582792 C16orf54Q6UWD8 224 aa9.7□□□□□ -0.86
SS18-222ENST00000582792 Q6ZR54 194 aa9.7□□□□□ -0.86
SS18-222ENST00000582792 GLMPQ8WWB7 406 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms