RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 CHCHD5Q9BSY4 110 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 LINC01549A6NIU2 74 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 C15orf62A8K5M9 175 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 C11orf44Q8N8P7 122 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 KLF12Q9Y4X4 402 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 ALPK2Q86TB3 2170 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 MORN3Q6PF18 240 aaPredicted RBP17.43■□□□□ 0.38
PTPRM-211ENST00000580170 Q8TAT8 98 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 RNF5Q99942 180 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 CHAC1Q9BUX1 264 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 FAM231BA6NCW3 169 aa17.42■□□□□ 0.38
PTPRM-211ENST00000580170 SNRNP200O75643 2136 aaKnown RBP17.42■□□□□ 0.38
PTPRM-211ENST00000580170 ZNF138P52744 262 aa17.42■□□□□ 0.38
PTPRM-211ENST00000580170 LINC00158P58513 81 aa17.42■□□□□ 0.38
PTPRM-211ENST00000580170 NDPQ00604 133 aa17.42■□□□□ 0.38
PTPRM-211ENST00000580170 RCHY1Q96PM5 261 aa17.42■□□□□ 0.38
PTPRM-211ENST00000580170 GATD1Q8NB37 220 aa17.42■□□□□ 0.38
PTPRM-211ENST00000580170 RALGAPA1Q6GYQ0 2036 aa17.42■□□□□ 0.38
PTPRM-211ENST00000580170 ASXL3Q9C0F0 2248 aa17.42■□□□□ 0.38
PTPRM-211ENST00000580170 ZNF329Q86UD4 541 aa17.41■□□□□ 0.38
PTPRM-211ENST00000580170 NSUN5P1Q3KNT7 163 aa17.41■□□□□ 0.38
PTPRM-211ENST00000580170 IGKV1D-17A0A075B6S4 117 aa17.41■□□□□ 0.38
PTPRM-211ENST00000580170 LY6DQ14210 128 aa17.41■□□□□ 0.38
PTPRM-211ENST00000580170 ZNF474Q6S9Z5 364 aaPredicted RBP17.41■□□□□ 0.38
PTPRM-211ENST00000580170 BUB1B-PAK6H3BSN5 160 aa17.41■□□□□ 0.38
PTPRM-211ENST00000580170 B3GALT5-AS1P59052 145 aa17.41■□□□□ 0.38
PTPRM-211ENST00000580170 ITGB1BP1O14713 200 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 C20orf204Q6ZNR8 217 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 IGFL4Q6B9Z1 124 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 Q6ZS49 121 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 TSSC4Q9Y5U2 329 aaPredicted RBP17.4■□□□□ 0.38
PTPRM-211ENST00000580170 TOMM40O96008 361 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 CRPP02741 224 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 MINOS1Q5TGZ0 78 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 MINOS1-NBL1R4GNA1 71 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 S100A7L2Q5SY68 101 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 PLEKHB2Q96CS7 222 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 MCRIP2Q9BUT9 160 aaKnown RBP17.4■□□□□ 0.38
PTPRM-211ENST00000580170 ZNF876PQ49A33 203 aa17.4■□□□□ 0.38
PTPRM-211ENST00000580170 ABCA7Q8IZY2 2146 aa17.39■□□□□ 0.38
PTPRM-211ENST00000580170 C9JAW5 83 aa17.39■□□□□ 0.38
PTPRM-211ENST00000580170 TMEM86BQ8N661 226 aa17.39■□□□□ 0.37
PTPRM-211ENST00000580170 TRBV7-1A0A0A6YYK4 115 aa17.39■□□□□ 0.37
PTPRM-211ENST00000580170 SPSB3Q6PJ21 355 aa17.39■□□□□ 0.37
PTPRM-211ENST00000580170 EFNA4P52798 201 aa17.39■□□□□ 0.37
PTPRM-211ENST00000580170 C5orf64Q2M2E5 130 aa17.39■□□□□ 0.37
PTPRM-211ENST00000580170 KIF26BQ2KJY2 2108 aa17.39■□□□□ 0.37
PTPRM-211ENST00000580170 DPH3P1Q9H4G8 78 aa17.39■□□□□ 0.37
PTPRM-211ENST00000580170 TRAV8-3A0A0A6YYJ7 113 aa17.38■□□□□ 0.37
PTPRM-211ENST00000580170 SRRM4A7MD48 611 aaKnown RBP17.38■□□□□ 0.37
PTPRM-211ENST00000580170 MDS2Q8NDY4 140 aa17.38■□□□□ 0.37
PTPRM-211ENST00000580170 Q6ZRM9 215 aa17.38■□□□□ 0.37
PTPRM-211ENST00000580170 SIGLEC9Q9Y336 463 aa17.38■□□□□ 0.37
PTPRM-211ENST00000580170 ZC2HC1BQ5TFG8 222 aa17.38■□□□□ 0.37
PTPRM-211ENST00000580170 A0A0G2JNJ9 132 aa17.37■□□□□ 0.37
PTPRM-211ENST00000580170 OOSP1A8MZH6 123 aa17.37■□□□□ 0.37
PTPRM-211ENST00000580170 ZNF415Q09FC8 603 aa17.37■□□□□ 0.37
PTPRM-211ENST00000580170 FOXL2NBQ6ZUU3 175 aa17.37■□□□□ 0.37
PTPRM-211ENST00000580170 C9orf139Q6ZV77 190 aa17.37■□□□□ 0.37
PTPRM-211ENST00000580170 Q9UFV3 132 aa17.37■□□□□ 0.37
PTPRM-211ENST00000580170 RNASE2P10153 161 aaKnown RBP17.37■□□□□ 0.37
PTPRM-211ENST00000580170 MLANAQ16655 118 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 DOCK6Q96HP0 2047 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 SMKR1H3BMG3 65 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 TMEM158Q8WZ71 300 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 FHL1Q13642 323 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 GAGE2AQ6NT46 116 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 LINC00477Q96M19 166 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 PRADC1Q9BSG0 188 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 CSTL1Q9H114 145 aa17.36■□□□□ 0.37
PTPRM-211ENST00000580170 GAGE1Q13065 139 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 LYPD1Q8N2G4 141 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 M0R1W7 72 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 ZNF688P0C7X2 276 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 TEX43Q6ZNM6 134 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 FREM3P0C091 2139 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 ANK1P16157 1881 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 FCN3O75636 299 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 Q0VG73 95 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 LYPD2Q6UXB3 125 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 ATP6V0BQ99437 205 aa17.35■□□□□ 0.37
PTPRM-211ENST00000580170 BRD3OSQ6XYD6 125 aa17.34■□□□□ 0.37
PTPRM-211ENST00000580170 C14orf178Q8N769 122 aaPredicted RBP17.34■□□□□ 0.37
PTPRM-211ENST00000580170 LCNL1Q6ZST4 164 aa17.34■□□□□ 0.37
PTPRM-211ENST00000580170 SCN5AQ14524 2016 aa17.34■□□□□ 0.37
PTPRM-211ENST00000580170 VCYO14598 125 aa17.34■□□□□ 0.37
PTPRM-211ENST00000580170 SAP30O75446 220 aa17.34■□□□□ 0.37
PTPRM-211ENST00000580170 Q86TA4 180 aa17.34■□□□□ 0.37
PTPRM-211ENST00000580170 DTX2Q86UW9 622 aa17.34■□□□□ 0.37
PTPRM-211ENST00000580170 C9orf118A6NHY6 69 aa17.33■□□□□ 0.37
PTPRM-211ENST00000580170 AMN1Q8IY45 258 aa17.33■□□□□ 0.37
PTPRM-211ENST00000580170 DSCR9P59020 149 aa17.33■□□□□ 0.37
PTPRM-211ENST00000580170 MST1LQ2TV78 715 aa17.33■□□□□ 0.37
PTPRM-211ENST00000580170 ICE1Q9Y2F5 2266 aa17.33■□□□□ 0.36
PTPRM-211ENST00000580170 H3BUX3 64 aa17.33■□□□□ 0.36
PTPRM-211ENST00000580170 LAMTOR3Q9UHA4 124 aa17.32■□□□□ 0.36
PTPRM-211ENST00000580170 STPG4Q8N801 248 aa17.32■□□□□ 0.36
PTPRM-211ENST00000580170 FNDC10F2Z333 226 aa17.32■□□□□ 0.36
PTPRM-211ENST00000580170 IGKV1-16P04430 117 aa17.32■□□□□ 0.36
PTPRM-211ENST00000580170 TRGV1A0A0A0MS02 117 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms