RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 NUDT10Q8NFP7 164 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 ZNF502Q8TBZ5 544 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 C22orf15Q8WYQ4 148 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 RNF125Q96EQ8 232 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 NUDT11Q96G61 164 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 CCDC140Q96MF4 163 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 ZNF48Q96MX3 618 aaPredicted RBP3.6□□□□□ -1.83
NUP85-213ENST00000579838 RASL11BQ9BPW5 248 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 ZFAND3Q9H8U3 227 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 OSTCQ9NRP0 149 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 TMEM14CQ9P0S9 112 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 FBXL7Q9UJT9 491 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 CDC42EP3Q9UKI2 254 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 KLK9Q9UKQ9 250 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 RNF114Q9Y508 228 aa3.6□□□□□ -1.83
NUP85-213ENST00000579838 TEP1Q99973 2627 aaKnown RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 HIVEP3Q5T1R4 2406 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 MAP1BP46821 2468 aaKnown RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 TRBV19A0A075B6N1 114 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 IGHV3-35A0A0C4DH35 117 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 SMIM27A0A1W2PRY6 76 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 XKRY2A2RUG3 117 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 CLPSL1A2RUU4 121 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 GRIFINA4D1Z8 144 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 A6NDX4 124 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 PPP5D1E7EU14 171 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 M0R3E3 92 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 GNG7O60262 68 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 GOSR1O95249 250 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 IGHG4P01861 327 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 APOHP02749 345 aaPredicted RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 CTSGP08311 255 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 SMIM6P0DI80 62 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 RD3LP0DJH9 198 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 HIST1H1EP10412 219 aaKnown RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 FABP4P15090 132 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 FCGR2BP31994 310 aaPredicted RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 IER3P46695 156 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 CNN1P51911 297 aaKnown RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 MFAP4P55083 255 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 YPEL3P61236 119 aaPredicted RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 SLC35B1P78383 322 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 COA6Q5JTJ3 125 aaKnown RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 IBA57Q5T440 356 aaKnown RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 PRR27Q6MZM9 219 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 MRPL54Q6P161 138 aaKnown RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 TMEM136Q6ZRR5 245 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 TCF24Q7RTU0 167 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 TMEM183AQ8IXX5 376 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 TMEM256Q8N2U0 113 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 CIARTQ8N365 385 aaPredicted RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 MAPK1IP1LQ8NDC0 245 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 OR10D4PQ8NGN7 298 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 NOL4LQ96MY1 436 aaPredicted RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 MS4A10Q96PG2 267 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 HIST1H2BLQ99880 126 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 MLST8Q9BVC4 326 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 MRPL18Q9H0U6 180 aaKnown RBP3.59□□□□□ -1.83
NUP85-213ENST00000579838 OTORQ9NRC9 128 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 C21orf62Q9NYP8 219 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 KLF12Q9Y4X4 402 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 TRAPPC1Q9Y5R8 145 aa3.59□□□□□ -1.83
NUP85-213ENST00000579838 ROS1P08922 2347 aa3.59□□□□□ -1.84
NUP85-213ENST00000579838 COL6A6A6NMZ7 2263 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 TRBV9A0A0B4J1U6 114 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 IGHV3-66A0A0C4DH42 116 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 C19orf71A6NCJ1 209 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 NDUFS8O00217 210 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 ZNF207O43670 478 aaKnown RBP3.58□□□□□ -1.84
NUP85-213ENST00000579838 GATCO43716 136 aaKnown RBP3.58□□□□□ -1.84
NUP85-213ENST00000579838 LTAP01374 205 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 TRBV12-3P01733 135 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 S100A8P05109 93 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 MSMBP08118 114 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 FAM106CPP0CH98 169 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 PAX1P15863 534 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 EDN2P20800 178 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 BRS3P32247 399 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 GPR183P32249 361 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 CRIP1P50238 77 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 CRIP2P52943 208 aaPredicted RBP3.58□□□□□ -1.84
NUP85-213ENST00000579838 RHOGP84095 191 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 KIAA1644Q3SXP7 199 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 ANKRD39Q53RE8 183 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 HIST2H2BCQ6DN03 193 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 CLEC2AQ6UVW9 174 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 TOMM20LQ6UXN7 152 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 CLEC19AQ6UXS0 136 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 LCNL1Q6ZST4 164 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 GOLT1AQ6ZVE7 132 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 FAM231DQ6ZW35 169 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 PRNTQ86SH4 94 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 BAGE2Q86Y30 109 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 LURAP1LQ8IV03 231 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 C5orf17Q8NAS9 161 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 GTSF1Q8WW33 167 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 ZC2HC1AQ96GY0 325 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 GRAMD2BQ96HH9 432 aa3.58□□□□□ -1.84
NUP85-213ENST00000579838 C8orf49Q96NF6 230 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms