RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 SOCS3O14543 225 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 RPL12P30050 165 aaKnown RBP11.54□□□□□ -0.56
NCBP3-207ENST00000577169 RPL29P47914 159 aaKnown RBP11.54□□□□□ -0.56
NCBP3-207ENST00000577169 CLINT1Q14677 625 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 OPCMLQ14982 345 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 ACTL10Q5JWF8 245 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 Q6ZRG5 221 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 Q6ZWC4 215 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 S100A7AQ86SG5 101 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 CHAC2Q8WUX2 184 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 TMEM37Q8WXS4 190 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 LINC00052Q96N35 136 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 DNAJC4Q9NNZ3 241 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 AGRNO00468 2067 aa11.54□□□□□ -0.56
NCBP3-207ENST00000577169 SPRY2O43597 315 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 COX7A2P2O60397 106 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 LYL1P12980 280 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 DEFB135Q30KP9 77 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 C10orf113Q5VZT2 155 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 LINC00305Q7Z4B0 112 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 THAP6Q8TBB0 222 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 SLC39A9Q9NUM3 307 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 HSPB11Q9Y547 144 aa11.53□□□□□ -0.56
NCBP3-207ENST00000577169 ELOA3CA0A087WX78 387 aaPredicted RBP11.52□□□□□ -0.57
NCBP3-207ENST00000577169 MPDU1O75352 247 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 RPL7P18124 248 aaKnown RBP11.52□□□□□ -0.57
NCBP3-207ENST00000577169 PSMB3P49720 205 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 MEOX2P50222 304 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 B2MP61769 119 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 FGL1Q08830 312 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 TRPT1Q86TN4 253 aaKnown RBP11.52□□□□□ -0.57
NCBP3-207ENST00000577169 RNF183Q96D59 192 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 EDA2RQ9HAV5 297 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 PXMP4Q9Y6I8 212 aa11.52□□□□□ -0.57
NCBP3-207ENST00000577169 ISLRO14498 428 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 ATF4P18848 351 aaPredicted RBP11.51□□□□□ -0.57
NCBP3-207ENST00000577169 DEFB1P60022 68 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 Q5BKY6 102 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 OR1L4Q8NGR5 311 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 NPCDR1Q9BY65 106 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 SMIM3Q9BZL3 60 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 WDR61Q9GZS3 305 aaKnown RBP11.51□□□□□ -0.57
NCBP3-207ENST00000577169 RNF24Q9Y225 148 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 TP53TG1Q9Y2A0 90 aa11.51□□□□□ -0.57
NCBP3-207ENST00000577169 TRAV5A0A0B4J249 113 aa11.5□□□□□ -0.57
NCBP3-207ENST00000577169 H3BMM0 161 aa11.5□□□□□ -0.57
NCBP3-207ENST00000577169 MRPS12O15235 138 aaKnown RBP11.5□□□□□ -0.57
NCBP3-207ENST00000577169 CA1P00915 261 aaPredicted RBP11.5□□□□□ -0.57
NCBP3-207ENST00000577169 GDF5OSQ5U4N7 250 aa11.5□□□□□ -0.57
NCBP3-207ENST00000577169 IGFL4Q6B9Z1 124 aa11.5□□□□□ -0.57
NCBP3-207ENST00000577169 C20orf173Q96LM9 149 aa11.5□□□□□ -0.57
NCBP3-207ENST00000577169 ATP5SQ99766 215 aa11.5□□□□□ -0.57
NCBP3-207ENST00000577169 TRAV8-2A0A0B4J237 113 aa11.49□□□□□ -0.57
NCBP3-207ENST00000577169 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
NCBP3-207ENST00000577169 GIPP09681 153 aaPredicted RBP11.49□□□□□ -0.57
NCBP3-207ENST00000577169 SAMD13Q5VXD3 122 aa11.49□□□□□ -0.57
NCBP3-207ENST00000577169 PFDN5Q99471 154 aa11.49□□□□□ -0.57
NCBP3-207ENST00000577169 WFDC1Q9HC57 220 aa11.49□□□□□ -0.57
NCBP3-207ENST00000577169 HUWE1Q7Z6Z7 4374 aaKnown RBP11.48□□□□□ -0.57
NCBP3-207ENST00000577169 A0A087X0K7 114 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 SNRPCP09234 159 aaKnown RBP11.48□□□□□ -0.57
NCBP3-207ENST00000577169 SPP1P10451 314 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 HLA-DRB4P13762 266 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 MORN3Q6PF18 240 aaPredicted RBP11.48□□□□□ -0.57
NCBP3-207ENST00000577169 BPIFA4PQ86YQ2 179 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 LRRC20Q8TCA0 184 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 SCGB1C1Q8TD33 95 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 SAV1Q9H4B6 383 aaPredicted RBP11.48□□□□□ -0.57
NCBP3-207ENST00000577169 RPRMQ9NS64 109 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
NCBP3-207ENST00000577169 F6UB75 175 aa11.47□□□□□ -0.57
NCBP3-207ENST00000577169 IFNA5P01569 189 aa11.47□□□□□ -0.57
NCBP3-207ENST00000577169 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
NCBP3-207ENST00000577169 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
NCBP3-207ENST00000577169 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
NCBP3-207ENST00000577169 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
NCBP3-207ENST00000577169 MUC7Q8TAX7 377 aa11.47□□□□□ -0.57
NCBP3-207ENST00000577169 ASB13Q8WXK3 278 aa11.47□□□□□ -0.57
NCBP3-207ENST00000577169 C17orf112F2Z3M2 114 aa11.46□□□□□ -0.57
NCBP3-207ENST00000577169 C4BPBP20851 252 aa11.46□□□□□ -0.57
NCBP3-207ENST00000577169 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
NCBP3-207ENST00000577169 EBLN2Q6P2I7 272 aa11.46□□□□□ -0.57
NCBP3-207ENST00000577169 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.57
NCBP3-207ENST00000577169 RARRES2Q99969 163 aa11.46□□□□□ -0.57
NCBP3-207ENST00000577169 TENM3Q9P273 2699 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 A0A0J9YX75 114 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 C3orf84H3BNL1 204 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 H3BQ15 152 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 H3BTX0 84 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
NCBP3-207ENST00000577169 FAM78BQ5VT40 261 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 SPATA31B1PQ5VZV4 182 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 OR11H2Q8NH07 326 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 AQP10Q96PS8 301 aa11.45□□□□□ -0.58
NCBP3-207ENST00000577169 CLEC5AQ9NY25 188 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms