RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 FAM24AA6NFZ4 105 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 UPK1BO75841 260 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 MIFP14174 115 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 S100A7P31151 101 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 EBLN2Q6P2I7 272 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 LINC00476Q8WZB0 136 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 SHANK2-AS3Q9BTD1 123 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 PTTG2Q9NZH5 202 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 SACSQ9NZJ4 4579 aa12.88□□□□□ -0.35
CTDNEP1-207ENST00000572043 IGHV3OR16-12A0A075B7B8 117 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 FNDC10F2Z333 226 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 GOSR2O14653 212 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 CST7O76096 145 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 MEOX2P50222 304 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 SELENOTP62341 195 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 IFITM3Q01628 133 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 FAM78BQ5VT40 261 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 SLC35B3Q9H1N7 401 aa12.87□□□□□ -0.35
CTDNEP1-207ENST00000572043 ELOA3CA0A087WX78 387 aaPredicted RBP12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 AGPAT2O15120 278 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 PLP1P60201 277 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 RAB32Q13637 225 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 SAMD13Q5VXD3 122 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 GPR82Q96P67 336 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 MGST2Q99735 147 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 ARV1Q9H2C2 271 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 RPRMQ9NS64 109 aa12.86□□□□□ -0.35
CTDNEP1-207ENST00000572043 DEDDO75618 318 aa12.85□□□□□ -0.35
CTDNEP1-207ENST00000572043 PRB4P10163 310 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-207ENST00000572043 PVALBP20472 110 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-207ENST00000572043 PATE2Q6UY27 113 aa12.85□□□□□ -0.35
CTDNEP1-207ENST00000572043 ZNF546Q86UE3 836 aa12.85□□□□□ -0.35
CTDNEP1-207ENST00000572043 ZNF709Q8N972 641 aa12.85□□□□□ -0.35
CTDNEP1-207ENST00000572043 GGACTQ9BVM4 153 aa12.85□□□□□ -0.35
CTDNEP1-207ENST00000572043 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
CTDNEP1-207ENST00000572043 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 A0A0J9YX75 114 aa12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 SIX6O95475 246 aa12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 SNRPCP09234 159 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 ZNF705DP0CH99 300 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 ZNF705BP0CI00 300 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 RPL7P18124 248 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 PSG9Q00887 426 aa12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 ZNF767PQ75MW2 155 aa12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 NRARPQ7Z6K4 114 aa12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-207ENST00000572043 IGSF23A1L1A6 192 aa12.83□□□□□ -0.36
CTDNEP1-207ENST00000572043 HLA-DMBP28068 263 aa12.83□□□□□ -0.36
CTDNEP1-207ENST00000572043 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
CTDNEP1-207ENST00000572043 CELA1Q9UNI1 258 aa12.83□□□□□ -0.36
CTDNEP1-207ENST00000572043 AGRNO00468 2067 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 UBE2L5PA0A1B0GUS4 154 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 COX7A2P2O60397 106 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 CAMLGP49069 296 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 EMP1P54849 157 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 IL15RAQ13261 267 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 SPATA31B1PQ5VZV4 182 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 MIC13Q5XKP0 118 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 Q6ZTC4 211 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 LINC00305Q7Z4B0 112 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 TMEM252Q8N6L7 170 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 LRRC20Q8TCA0 184 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 LYRM2Q9NU23 88 aaPredicted RBP12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 UQCC1Q9NVA1 299 aa12.82□□□□□ -0.36
CTDNEP1-207ENST00000572043 INMT-MINDY4F8WBC2 141 aa12.81□□□□□ -0.36
CTDNEP1-207ENST00000572043 SULT1A1P50225 295 aa12.81□□□□□ -0.36
CTDNEP1-207ENST00000572043 RAB31Q13636 194 aa12.81□□□□□ -0.36
CTDNEP1-207ENST00000572043 ZNF705AQ6ZN79 300 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-207ENST00000572043 S100A7AQ86SG5 101 aa12.81□□□□□ -0.36
CTDNEP1-207ENST00000572043 C2CD4CQ8TF44 421 aa12.81□□□□□ -0.36
CTDNEP1-207ENST00000572043 LYSTQ99698 3801 aa12.81□□□□□ -0.36
CTDNEP1-207ENST00000572043 HRH4Q9H3N8 390 aa12.81□□□□□ -0.36
CTDNEP1-207ENST00000572043 IGLL5B9A064 214 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 H3BTX0 84 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 CNN1P51911 297 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 BAXQ07812 192 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 LRRC37A5PQ49AS3 106 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 PXDC1Q5TGL8 231 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 MORN5Q5VZ52 161 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 C10orf113Q5VZT2 155 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 STX12Q86Y82 276 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 TMEM37Q8WXS4 190 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 CLUHP3Q96NS8 147 aa12.8□□□□□ -0.36
CTDNEP1-207ENST00000572043 ZNF705FA8MVS1 300 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-207ENST00000572043 SPINK13Q1W4C9 94 aa12.79□□□□□ -0.36
CTDNEP1-207ENST00000572043 WDR83OSQ9Y284 106 aa12.79□□□□□ -0.36
CTDNEP1-207ENST00000572043 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
CTDNEP1-207ENST00000572043 HYDINQ4G0P3 5121 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 A0A087X0K7 114 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 C11orf94C9JXX5 98 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 M0R2Z0 102 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 MRPS12O15235 138 aaKnown RBP12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 DUSP14O95147 198 aaKnown RBP12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 CXCL3P19876 107 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 FGF7P21781 194 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 S100A11P31949 105 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 HBG1P69891 147 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 HBG2P69892 147 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms