RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 IFNA1P01562 189 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 PRB4P10163 310 aaPredicted RBP0.97□□□□□ -2.25
LINC00557-201ENST00000563184 PPP1R2P41236 205 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 FAM74A1Q5RGS3 127 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 TRIQKQ629K1 86 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 PPP1R2P3Q6NXS1 205 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 ST6GALNAC3Q8NDV1 305 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 SH3BGRL3Q9H299 93 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 BIN3Q9NQY0 253 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 LAMTOR3Q9UHA4 124 aa0.97□□□□□ -2.25
LINC00557-201ENST00000563184 PPP5D1E7EU14 171 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 PGRMC1O00264 195 aaKnown RBP0.96□□□□□ -2.26
LINC00557-201ENST00000563184 CST8O60676 142 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 PIAS1O75925 651 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 FABP1P07148 127 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 GNG10P50151 68 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 TFAMQ00059 246 aaKnown RBP0.96□□□□□ -2.26
LINC00557-201ENST00000563184 BCL2L15Q5TBC7 163 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 SMIM15Q7Z3B0 74 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 LYG2Q86SG7 212 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 OR13C6PQ8NH95 151 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 NEK7Q8TDX7 302 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 DYDC1Q8WWB3 177 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 MALSU1Q96EH3 234 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 PBOV1Q9GZY1 135 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 GID8Q9NWU2 228 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 MIA2Q96PC5 1412 aa0.96□□□□□ -2.26
LINC00557-201ENST00000563184 ASCC3Q8N3C0 2202 aaKnown RBP0.96□□□□□ -2.26
LINC00557-201ENST00000563184 A0A1B0GV72 72 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 H7C1C5 153 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 TMEM256-PLSCR3K7ERE1 68 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 ATG12O94817 140 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 IDO1P14902 403 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 PHBP35232 272 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 NCALDP61601 193 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 LCN6P62502 163 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 UBE2BP63146 152 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 PSG9Q00887 426 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 C3orf33Q6P1S2 294 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 ZNF833PQ6ZTB9 187 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 GRINAQ7Z429 371 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 STX19Q8N4C7 294 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 NUP35Q8NFH5 326 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 LINC00052Q96N35 136 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 DDA1Q9BW61 102 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 PCBD2Q9H0N5 130 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 LYRM2Q9NU23 88 aaPredicted RBP0.95□□□□□ -2.26
LINC00557-201ENST00000563184 SPANXCQ9NY87 97 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 PRNDQ9UKY0 176 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 SSR3Q9UNL2 185 aa0.95□□□□□ -2.26
LINC00557-201ENST00000563184 ARHGEF11O15085 1522 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 CECR2Q9BXF3 1484 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 IGHV1-58A0A0C4DH39 117 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 G3V2T6 193 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 NUPR1O60356 82 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 BANF1O75531 89 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 KLF7O75840 302 aaPredicted RBP0.94□□□□□ -2.26
LINC00557-201ENST00000563184 IFNA21P01568 189 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 APOA2P02652 100 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 G0S2P27469 103 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 CRYBA4P53673 196 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 LINC00322Q6ZN03 302 aaPredicted RBP0.94□□□□□ -2.26
LINC00557-201ENST00000563184 EXOC3-AS1Q8N2X6 119 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 CANT1Q8WVQ1 401 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 PYDC1Q8WXC3 89 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 TP53RKQ96S44 253 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 MED29Q9NX70 200 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 SMPXQ9UHP9 88 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 PCTPQ9UKL6 214 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 UFC1Q9Y3C8 167 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 TNS3Q68CZ2 1445 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
LINC00557-201ENST00000563184 RB1CC1Q8TDY2 1594 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 YTHDC2Q9H6S0 1430 aaKnown RBP0.93□□□□□ -2.26
LINC00557-201ENST00000563184 DUXBA0A1W2PPF3 345 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 TLCD2A6NGC4 264 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 H0YJX3 145 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 NCR3O14931 201 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 GGCTO75223 188 aaKnown RBP0.93□□□□□ -2.26
LINC00557-201ENST00000563184 CD2P06729 351 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 SERPINB1P30740 379 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 DSCR4P56555 118 aaPredicted RBP0.93□□□□□ -2.26
LINC00557-201ENST00000563184 GNG3P63215 75 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 MYL5Q02045 173 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 KRTAP26-1Q6PEX3 210 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 DCUN1D2Q6PH85 259 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 AKAP14Q86UN6 197 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 TAC4Q86UU9 113 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 PBDC1Q9BVG4 233 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 C19orf12Q9NSK7 152 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 TMEM14CQ9P0S9 112 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 LY96Q9Y6Y9 160 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 ZFC3H1O60293 1989 aaKnown RBP0.93□□□□□ -2.26
LINC00557-201ENST00000563184 NUP98P52948 1817 aa0.93□□□□□ -2.26
LINC00557-201ENST00000563184 MYO5AQ9Y4I1 1855 aaKnown RBP0.92□□□□□ -2.26
LINC00557-201ENST00000563184 TRAV10A0A0B4J240 114 aa0.92□□□□□ -2.26
LINC00557-201ENST00000563184 GNG14A0A1W2PPG7 69 aa0.92□□□□□ -2.26
LINC00557-201ENST00000563184 RIIAD1A6NNX1 92 aa0.92□□□□□ -2.26
LINC00557-201ENST00000563184 E7EUB6 86 aa0.92□□□□□ -2.26
LINC00557-201ENST00000563184 CRHP06850 196 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms