RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TRAV34A0A0B4J273 112 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 G3V318 75 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 PFN1P07737 140 aaKnown RBP7.37□□□□□ -1.23
LINC00838-201ENST00000562956 GATA3P23771 443 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 CRYBB3P26998 211 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 SUMO1P63165 101 aaKnown RBP7.37□□□□□ -1.23
LINC00838-201ENST00000562956 VN1R17PQ8TDU5 208 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 TMEM242Q9NWH2 141 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 HIGD1AQ9Y241 93 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 MOB4Q9Y3A3 225 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 ABCA1O95477 2261 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 A0A1W2PRE2 83 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 GNG7O60262 68 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 PLA2G2AP14555 144 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 MFAP4P55083 255 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 HIST2H2BCQ6DN03 193 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 FAM110DQ8TAY7 271 aaPredicted RBP7.37□□□□□ -1.23
LINC00838-201ENST00000562956 C21orf62Q9NYP8 219 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 THYN1Q9P016 225 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 FBXL7Q9UJT9 491 aa7.37□□□□□ -1.23
LINC00838-201ENST00000562956 H3BUX3 64 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 TOMM40O96008 361 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 LY6EQ16553 131 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 Q56UQ5 140 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 GBGT1Q8N5D6 347 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 BEX4Q9NWD9 120 aaPredicted RBP7.36□□□□□ -1.23
LINC00838-201ENST00000562956 MRPL27Q9P0M9 148 aaKnown RBP7.36□□□□□ -1.23
LINC00838-201ENST00000562956 ANKRD17O75179 2603 aaKnown RBP7.36□□□□□ -1.23
LINC00838-201ENST00000562956 TGFAP01135 160 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 GP9P14770 177 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 HNF1AP20823 631 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 CNN1P51911 297 aaKnown RBP7.36□□□□□ -1.23
LINC00838-201ENST00000562956 ERASQ7Z444 233 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 ZNF491Q8N8L2 437 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 ZNF48Q96MX3 618 aaPredicted RBP7.36□□□□□ -1.23
LINC00838-201ENST00000562956 SLC25A39Q9BZJ4 359 aaPredicted RBP7.36□□□□□ -1.23
LINC00838-201ENST00000562956 CTDSP1Q9GZU7 261 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 ABCA12Q86UK0 2595 aa7.36□□□□□ -1.23
LINC00838-201ENST00000562956 MDFIC2A0A1B0GVS7 189 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 ZNF320A2RRD8 509 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 OR2T8A6NH00 312 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 LOXL1Q08397 574 aaPredicted RBP7.35□□□□□ -1.23
LINC00838-201ENST00000562956 Q5PR19 223 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 BCL6BQ8N143 479 aaPredicted RBP7.35□□□□□ -1.23
LINC00838-201ENST00000562956 STXBP6Q8NFX7 210 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 BLNKQ8WV28 456 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 TRAV30A0A087WSZ9 112 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 KIR2DL5BA0A0G2JN68 375 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 KIR2DL5BA0A0G2JPC4 375 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 IL4P05112 153 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 LINC00614P0C842 121 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 YPEL3P61236 119 aaPredicted RBP7.35□□□□□ -1.23
LINC00838-201ENST00000562956 C15orf32Q32M92 178 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 KIR2DL5AQ8N109 375 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 OCC1Q8TAD7 63 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 LINC00527Q9UJ94 153 aa7.35□□□□□ -1.23
LINC00838-201ENST00000562956 WI2-2373I1.2A0A1W2PRP0 233 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 A6NDX4 124 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 H3BTX0 84 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 RANP62826 216 aaKnown RBP7.34□□□□□ -1.23
LINC00838-201ENST00000562956 RHOGP84095 191 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 ZNF329Q86UD4 541 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 RNF125Q96EQ8 232 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 IMMP2LQ96T52 175 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 RNF24Q9Y225 148 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 TRAPPC1Q9Y5R8 145 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 NAV2Q8IVL1 2488 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 TRBV9A0A0B4J1U6 114 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 HELTA6NFD8 242 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 J3QKU1 62 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 K7EN84 100 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 CTSGP08311 255 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 NBEAP1P0C6P0 100 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 IGHV4-31P0DP07 118 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 MYCNOSP40205 109 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 PTTG1IPP53801 180 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 KLK9Q2XQG4 91 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 LRRC75A-AS1Q8N1F1 130 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 CHRDL1Q9BU40 450 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 KLK9Q9UKQ9 250 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 APCP25054 2843 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 ZANQ9Y493 2812 aa7.34□□□□□ -1.23
LINC00838-201ENST00000562956 LOC102724200A0A096LPH7 203 aaPredicted RBP7.34□□□□□ -1.24
LINC00838-201ENST00000562956 ACTL10Q5JWF8 245 aa7.34□□□□□ -1.24
LINC00838-201ENST00000562956 LINC00479Q96M42 142 aa7.34□□□□□ -1.24
LINC00838-201ENST00000562956 SHANK2-AS3Q9BTD1 123 aa7.34□□□□□ -1.24
LINC00838-201ENST00000562956 C9JCJ5 164 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 H3BRN7 92 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 M0QZK8 103 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 GGCTO75223 188 aaKnown RBP7.33□□□□□ -1.24
LINC00838-201ENST00000562956 ADMP35318 185 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 GAGE1Q13065 139 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 C19orf54Q5BKX5 351 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 CENPWQ5EE01 88 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 COA6Q5JTJ3 125 aaKnown RBP7.33□□□□□ -1.24
LINC00838-201ENST00000562956 KRTAP1-3Q8IUG1 177 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 ZNF502Q8TBZ5 544 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 ANAPC16Q96DE5 110 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 Q96MF0 132 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 MIEN1Q9BRT3 115 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms