RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 GPR82Q96P67 336 aa9.69□□□□□ -0.86
USB1-205ENST00000561743 SLC25A39Q9BZJ4 359 aaPredicted RBP9.69□□□□□ -0.86
USB1-205ENST00000561743 C20orf85Q9H1P6 137 aa9.69□□□□□ -0.86
USB1-205ENST00000561743 IGHV3OR16-12A0A075B7B8 117 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 SMIM9A6NGZ8 99 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 A8MTW9 85 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 LYRM1O43325 122 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 TSC22D2O75157 780 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 LINC00869P0C866 280 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 S100A7P31151 101 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 PLP1P60201 277 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 DLK1P80370 383 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 CNPY1Q3B7I2 92 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 SHANK2-AS3Q9BTD1 123 aa9.68□□□□□ -0.86
USB1-205ENST00000561743 DEFB131BA0A096LNP1 70 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 FNDC10F2Z333 226 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 HYPMO75409 117 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 AMBPP02760 352 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 TAS2R30P59541 319 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 RAP2BP61225 183 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 SELENOTP62341 195 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 IGFL4Q6B9Z1 124 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 AMTNQ6UX39 209 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 C1orf158Q8N1D5 194 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 OR10P1Q8NGE3 313 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 UHRF2Q96PU4 802 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 RNF126Q9BV68 326 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 GSKIPQ9P0R6 139 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 HIGD1AQ9Y241 93 aa9.67□□□□□ -0.86
USB1-205ENST00000561743 DNAH10Q8IVF4 4471 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 C7orf66A4D0T2 115 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 TMEM189A5PLL7 270 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 K7EPK0 472 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 CCSO14618 274 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 MBPP02686 304 aaPredicted RBP9.66□□□□□ -0.86
USB1-205ENST00000561743 TCRBP04435 133 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 OR5G3P0C626 314 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 EMP1P54849 157 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 SLC38A11Q08AI6 406 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 ARL16Q0P5N6 197 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 RNF182Q8N6D2 247 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 NPVFQ9HCQ7 196 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 NDUFA13Q9P0J0 144 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 RFNGQ9Y644 331 aa9.66□□□□□ -0.86
USB1-205ENST00000561743 TRAV6A0A075B6T7 132 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 RPL7P18124 248 aaKnown RBP9.65□□□□□ -0.86
USB1-205ENST00000561743 CNN1P51911 297 aaKnown RBP9.65□□□□□ -0.86
USB1-205ENST00000561743 FGL1Q08830 312 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 TEPPQ6URK8 271 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 PATE2Q6UY27 113 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 ARL6Q9H0F7 186 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 NUDT15Q9NV35 164 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 MGAT4CQ9UBM8 478 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 DKK2Q9UBU2 259 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 GOLT1BQ9Y3E0 138 aa9.65□□□□□ -0.86
USB1-205ENST00000561743 A0A087X0K7 114 aa9.64□□□□□ -0.87
USB1-205ENST00000561743 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
USB1-205ENST00000561743 SEC22CQ9BRL7 303 aa9.64□□□□□ -0.87
USB1-205ENST00000561743 LOC102723971A0A1B0GUV8 181 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 M0R2Z0 102 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 AGPAT2O15120 278 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
USB1-205ENST00000561743 DUSP14O95147 198 aaKnown RBP9.63□□□□□ -0.87
USB1-205ENST00000561743 HBE1P02100 147 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 ZNF846Q147U1 533 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 ZNF546Q86UE3 836 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 ZNF738Q8NE65 137 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 OR11H7Q8NGC8 314 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 ZNF431Q8TF32 576 aaPredicted RBP9.63□□□□□ -0.87
USB1-205ENST00000561743 IGF2BP2-AS1Q96M15 143 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 CCDC32Q9BV29 185 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 GGACTQ9BVM4 153 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 ARV1Q9H2C2 271 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 C11orf1Q9H5F2 150 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 YTHDF2Q9Y5A9 579 aaKnown RBP9.63□□□□□ -0.87
USB1-205ENST00000561743 DNAH6Q9C0G6 4158 aa9.63□□□□□ -0.87
USB1-205ENST00000561743 TEX48A0A1B0GUV7 120 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 FAM25EA8MYX2 175 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 GOSR2O14653 212 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 MRPS12O15235 138 aaKnown RBP9.62□□□□□ -0.87
USB1-205ENST00000561743 CXCL3P19876 107 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 RRN3P1Q2M238 152 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 PXDC1Q5TGL8 231 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 S100A7AQ86SG5 101 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 MGST2Q99735 147 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 NIPSNAP3BQ9BS92 247 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 NDUFAF3Q9BU61 184 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 PLA2G2EQ9NZK7 142 aa9.62□□□□□ -0.87
USB1-205ENST00000561743 LSM5Q9Y4Y9 91 aaKnown RBP9.62□□□□□ -0.87
USB1-205ENST00000561743 C5orf51A6NDU8 294 aa9.61□□□□□ -0.87
USB1-205ENST00000561743 L7N2F9 121 aa9.61□□□□□ -0.87
USB1-205ENST00000561743 INSP01308 110 aa9.61□□□□□ -0.87
USB1-205ENST00000561743 VAMP2P63027 116 aa9.61□□□□□ -0.87
USB1-205ENST00000561743 MORN5Q5VZ52 161 aa9.61□□□□□ -0.87
USB1-205ENST00000561743 LINC00305Q7Z4B0 112 aa9.61□□□□□ -0.87
USB1-205ENST00000561743 BAP18Q8IXM2 172 aa9.61□□□□□ -0.87
USB1-205ENST00000561743 C12orf45Q8N5I9 185 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms