RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 INSL3P51460 131 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 C4orf26Q17RF5 130 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 PRSS33Q8NF86 280 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 DKK2Q9UBU2 259 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 ADAMTS20P59510 1910 aa5.35□□□□□ -1.55
TSPAN3-209ENST00000560715 IGHV1OR21-1A0A087WYE8 117 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 TINCRA0A1B0GVN0 87 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 GNLYP22749 145 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 IBA57Q5T440 356 aaKnown RBP5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 C18orf15Q96N68 181 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 OR1A1Q9P1Q5 309 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 USP34Q70CQ2 3546 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 ABCA7Q8IZY2 2146 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 A0A087WX48 190 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 CT45A6P0DMU7 189 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 CT45A5P0DMU8 189 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 CT45A7P0DMV0 189 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 BCL3P20749 454 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 CXCL12P48061 93 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 CATR1Q13166 79 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 CT45A1Q5HYN5 189 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 Q6ZSN1 163 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 CT45A3Q8NHU0 189 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 MPC1Q9Y5U8 109 aa5.34□□□□□ -1.55
TSPAN3-209ENST00000560715 IGKV1-27A0A075B6S5 117 aa5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 IGKV1-12A0A0C4DH73 117 aa5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 IGKV1D-12P01611 117 aa5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 RPL35AP18077 110 aaKnown RBP5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 GCHFRP30047 84 aa5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 MFAP2P55001 183 aa5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 ZNF146Q15072 292 aa5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 Q6ZT83 130 aa5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 VPREB3Q9UKI3 123 aa5.34□□□□□ -1.56
TSPAN3-209ENST00000560715 KIAA1549Q9HCM3 1950 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 TNRC6BQ9UPQ9 1833 aaKnown RBP5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 SPAG17Q6Q759 2223 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 IGKV3D-11A0A0A0MRZ8 115 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 GAGE12JA6NER3 117 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 C15orf62A8K5M9 175 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 E9PLD3 99 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 GAGE7O76087 117 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 GAGE12FP0CL80 117 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 GAGE12GP0CL81 117 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 GAGE12IP0CL82 117 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 EDDM3BP56851 147 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 RBM11P57052 281 aaKnown RBP5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 TAS2R45P59539 299 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 GNG3P63215 75 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 FOXI1Q12951 378 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 GAGE4Q13068 117 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 Q6AWC8 147 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 VKORC1L1Q8N0U8 176 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 SLC25A45Q8N413 288 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 ZNF491Q8N8L2 437 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 RFESDQ8TAC1 157 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 C8orf46Q8TAG6 207 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 EMC6Q9BV81 110 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 FBXL15Q9H469 300 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 PRO0461Q9UI25 63 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 INSIG2Q9Y5U4 225 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 TTC28Q96AY4 2481 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 MUC3AQ02505 3323 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 IGKV1-6A0A0C4DH72 117 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 C17orf51A8MQB3 221 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 FABP5P3A8MUU1 101 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 IGKV3-11P04433 115 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 TMEM42Q69YG0 159 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 ZFAND6Q6FIF0 208 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 OR1L3Q8NH93 324 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 ATP6V0E2Q8NHE4 81 aa5.33□□□□□ -1.56
TSPAN3-209ENST00000560715 ADAMTS9Q9P2N4 1935 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 APOMO95445 188 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 IGLV2-8P01709 118 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 OPRK1P41145 380 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 DAZAP2Q15038 168 aaPredicted RBP5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 RTL8BQ17RB0 113 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 TBC1D28Q2M2D7 210 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 TMEM133Q9H2Q1 129 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 DEPPQ9NTK1 212 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 KLF12Q9Y4X4 402 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 TRIOO75962 3097 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 H3BMG7 143 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 IGHG4P01861 327 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 UBE2E1P51965 193 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 APOC4P55056 127 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 PSG5Q15238 335 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 PCSK4Q6UW60 755 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 ATP5L2Q7Z4Y8 100 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 NUP35Q8NFH5 326 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 FAM168AQ92567 244 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 UBE2E2Q96LR5 201 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 IL36RNQ9UBH0 155 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 KMT2EQ8IZD2 1858 aa5.32□□□□□ -1.56
TSPAN3-209ENST00000560715 RALGAPA1Q6GYQ0 2036 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 TEX50A0A1B0GTY4 177 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 FOXL2NBQ6ZUU3 175 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 TEX29Q8N6K0 151 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 Q8TCH9 128 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms