RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 ATF4P18848 351 aaPredicted RBP7.57□□□□□ -1.2
USP3-216ENST00000559873 TFPI2P48307 235 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 DEFA6Q01524 100 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 ACOT6Q3I5F7 207 aaPredicted RBP7.57□□□□□ -1.2
USP3-216ENST00000559873 FFAR4Q5NUL3 377 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 FAM90A2PQ658T7 463 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 BPIFA4PQ86YQ2 179 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 UHRF2Q96PU4 802 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 MS4A6AQ9H2W1 248 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 WFDC1Q9HC57 220 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 SELENOKQ9Y6D0 94 aa7.57□□□□□ -1.2
USP3-216ENST00000559873 A0A1B0GVG6 124 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 OR11H12B2RN74 326 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 ID1P41134 155 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 TAS2R45P59539 299 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 SNRPD3P62318 126 aaKnown RBP7.56□□□□□ -1.2
USP3-216ENST00000559873 RHOBP62745 196 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 SERF2P84101 59 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 FAM78BQ5VT40 261 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 RPL7L1Q6DKI1 246 aaKnown RBP7.56□□□□□ -1.2
USP3-216ENST00000559873 GBGT1Q8N5D6 347 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 OR11H4Q8NGC9 324 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 OR2G3Q8NGZ4 309 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 MRAPQ8TCY5 172 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 TMEM37Q8WXS4 190 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 FAM110AQ9BQ89 295 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 ZNF471Q9BX82 626 aaPredicted RBP7.56□□□□□ -1.2
USP3-216ENST00000559873 SLC25A32Q9H2D1 315 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 SEPSECSQ9HD40 501 aaKnown RBP7.56□□□□□ -1.2
USP3-216ENST00000559873 SMAD5-AS1Q9Y6J3 95 aa7.56□□□□□ -1.2
USP3-216ENST00000559873 CXCL2P19875 107 aa7.55□□□□□ -1.2
USP3-216ENST00000559873 M6PRP20645 277 aa7.55□□□□□ -1.2
USP3-216ENST00000559873 ATP6V0CP27449 155 aa7.55□□□□□ -1.2
USP3-216ENST00000559873 LCN15Q6UWW0 184 aa7.55□□□□□ -1.2
USP3-216ENST00000559873 PATE2Q6UY27 113 aa7.55□□□□□ -1.2
USP3-216ENST00000559873 TMUB2Q71RG4 321 aa7.55□□□□□ -1.2
USP3-216ENST00000559873 WFDC3Q8IUB2 231 aa7.55□□□□□ -1.2
USP3-216ENST00000559873 FUT9Q9Y231 359 aa7.55□□□□□ -1.2
USP3-216ENST00000559873 DNAH3Q8TD57 4116 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 A0A087X0K7 114 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 A0A1W2PPV4 95 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 K7EQG2 157 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 PRB2P02812 416 aaPredicted RBP7.54□□□□□ -1.2
USP3-216ENST00000559873 CD7P09564 240 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 TPT1P13693 172 aaKnown RBP7.54□□□□□ -1.2
USP3-216ENST00000559873 PSMB3P49720 205 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 KHDC3LQ587J8 217 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 LEMD1Q68G75 181 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 EIF5AL1Q6IS14 154 aaKnown RBP7.54□□□□□ -1.2
USP3-216ENST00000559873 LRRC20Q8TCA0 184 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 DCANP1Q8TF63 244 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 C16orf92Q96LL3 132 aa7.54□□□□□ -1.2
USP3-216ENST00000559873 K7EIL1 84 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 ISLRO14498 428 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 OR7C2O60412 319 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 CDC34P49427 236 aaPredicted RBP7.53□□□□□ -1.2
USP3-216ENST00000559873 GUK1Q16774 197 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 ODF3L2Q3SX64 289 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 TMEM41BQ5BJD5 291 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 DEFB121Q5J5C9 76 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 GCSAMLQ5JQS6 135 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 AKR1C8PQ5T2L2 129 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 OR10G4Q8NGN3 311 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 OR10G9Q8NGN4 311 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 OR10G7Q8NGN6 311 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 SLC50A1Q9BRV3 221 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 TUBA4BQ9H853 241 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 MAP6D1Q9H9H5 199 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 CYTL1Q9NRR1 136 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 TMEM14CQ9P0S9 112 aa7.53□□□□□ -1.2
USP3-216ENST00000559873 A8MZ25 164 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 ZNF688P0C7X2 276 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 RAB2AP61019 212 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 PDE6HQ13956 83 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 PSMG4Q5JS54 123 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 FAM122CQ6P4D5 195 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 PQLC2Q6ZP29 291 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 STOML3Q8TAV4 291 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 SH3BGRL3Q9H299 93 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 HRH4Q9H3N8 390 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 SRD5A3Q9H8P0 318 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 CLEC5AQ9NY25 188 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 UBQLN2Q9UHD9 624 aa7.52□□□□□ -1.21
USP3-216ENST00000559873 TRAV5A0A0B4J249 113 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 UMAD1C9J7I0 102 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 ZNF253O75346 499 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 SEC11BP0C7V7 166 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 IGLC2P0DOY2 106 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 IGHV4-30-4P0DP06 118 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 HIST1H1EP10412 219 aaKnown RBP7.51□□□□□ -1.21
USP3-216ENST00000559873 SPP1P10451 314 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 DEFB131AP59861 70 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 UBE2L3P68036 154 aaKnown RBP7.51□□□□□ -1.21
USP3-216ENST00000559873 MIR17HGQ75NE6 70 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 SLC51BQ86UW2 128 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 BAP18Q8IXM2 172 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 Q8N1Y9 231 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 C9orf62Q8N4C0 152 aa7.51□□□□□ -1.21
USP3-216ENST00000559873 DEFB125Q8N687 156 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms