RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 IAH1Q2TAA2 248 aaPredicted RBP7.32□□□□□ -1.24
USP3-207ENST00000558218 PXDC1Q5TGL8 231 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 EBLN2Q6P2I7 272 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 ZNF705AQ6ZN79 300 aaPredicted RBP7.32□□□□□ -1.24
USP3-207ENST00000558218 C2CD4CQ8TF44 421 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 LINC00052Q96N35 136 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 TMEM147Q9BVK8 224 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 WDR12Q9GZL7 423 aaKnown RBP7.32□□□□□ -1.24
USP3-207ENST00000558218 RPRMQ9NS64 109 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 AP5S1Q9NUS5 200 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 STARD9Q9P2P6 4700 aa7.32□□□□□ -1.24
USP3-207ENST00000558218 IGHV4-28A0A0C4DH34 117 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 TMEM189A5PLL7 270 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 NPIPB6E9PJ23 425 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 SSSCA1O60232 199 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 HYPMO75409 117 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 DEDDO75618 318 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 RPL7P18124 248 aaKnown RBP7.31□□□□□ -1.24
USP3-207ENST00000558218 ORM2P19652 201 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 RAP2BP61225 183 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 ZNF846Q147U1 533 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 CYP2G1PQ6ZSU1 146 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 ACOT7LQ6ZUV0 252 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 ZBTB8BQ8NAP8 495 aaPredicted RBP7.31□□□□□ -1.24
USP3-207ENST00000558218 S100ZQ8WXG8 99 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 C20orf85Q9H1P6 137 aa7.31□□□□□ -1.24
USP3-207ENST00000558218 ZNF705FA8MVS1 300 aaPredicted RBP7.3□□□□□ -1.24
USP3-207ENST00000558218 H3BP45 60 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 DEFB4AO15263 64 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 ZNF705DP0CH99 300 aaPredicted RBP7.3□□□□□ -1.24
USP3-207ENST00000558218 ZNF705BP0CI00 300 aaPredicted RBP7.3□□□□□ -1.24
USP3-207ENST00000558218 PSG9Q00887 426 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 TEPPQ6URK8 271 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 TMEM182Q6ZP80 229 aaPredicted RBP7.3□□□□□ -1.24
USP3-207ENST00000558218 ZNF431Q8TF32 576 aaPredicted RBP7.3□□□□□ -1.24
USP3-207ENST00000558218 C16orf92Q96LL3 132 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 SHANK2-AS3Q9BTD1 123 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 RSG1Q9BU20 258 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 SLC25A39Q9BZJ4 359 aaPredicted RBP7.3□□□□□ -1.24
USP3-207ENST00000558218 SLC25A32Q9H2D1 315 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 GSKIPQ9P0R6 139 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 XCL2Q9UBD3 114 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 MGAT4CQ9UBM8 478 aa7.3□□□□□ -1.24
USP3-207ENST00000558218 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 TRAV10A0A0B4J240 114 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 A0A0J9YX75 114 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 SMCO3A2RU48 225 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 C7orf66A4D0T2 115 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 A8MTW9 85 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 H3BRN7 92 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 DUSP14O95147 198 aaKnown RBP7.29□□□□□ -1.24
USP3-207ENST00000558218 MBPP02686 304 aaPredicted RBP7.29□□□□□ -1.24
USP3-207ENST00000558218 AMBPP02760 352 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 METTL15P1P0C7V9 234 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 GATA2P23769 480 aaPredicted RBP7.29□□□□□ -1.24
USP3-207ENST00000558218 HLA-DMBP28068 263 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 MZT2BQ6NZ67 158 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 SLC25A22Q9H936 323 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 CLEC5AQ9NY25 188 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 HIGD1AQ9Y241 93 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 LYSTQ99698 3801 aa7.29□□□□□ -1.24
USP3-207ENST00000558218 RYR2Q92736 4967 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 A0A087X0K7 114 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 TEX48A0A1B0GUV7 120 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 L7N2F9 121 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 GOSR2O14653 212 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 SCGB1D2O95969 90 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 LINC00869P0C866 280 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 PVALBP20472 110 aaPredicted RBP7.28□□□□□ -1.24
USP3-207ENST00000558218 B2MP61769 119 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 VAMP2P63027 116 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 RAB31Q13636 194 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 GDF5OSQ5U4N7 250 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 FAM78BQ5VT40 261 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 ZNF546Q86UE3 836 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 C12orf45Q8N5I9 185 aaPredicted RBP7.28□□□□□ -1.24
USP3-207ENST00000558218 ZNF709Q8N972 641 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 OR4B1Q8NGF8 309 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 C2orf50Q96LR7 162 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 C17orf77Q96MU5 243 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 RNF126Q9BV68 326 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 DOK5Q9P104 306 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 APLNQ9ULZ1 77 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 RCL1Q9Y2P8 373 aaKnown RBP7.28□□□□□ -1.24
USP3-207ENST00000558218 GOLT1BQ9Y3E0 138 aa7.28□□□□□ -1.24
USP3-207ENST00000558218 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 SACSQ9NZJ4 4579 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 TRAV6A0A075B6T7 132 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 FAM240BA0A1B0GVZ2 78 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 C5orf51A6NDU8 294 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 OR5G3P0C626 314 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 SPART-AS1P0CW21 52 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 OXA1LQ15070 435 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 NUDT15Q9NV35 164 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 RFNGQ9Y644 331 aa7.27□□□□□ -1.25
USP3-207ENST00000558218 IGLL5B9A064 214 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 AGPAT2O15120 278 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 CXCL2P19875 107 aa7.26□□□□□ -1.25
USP3-207ENST00000558218 S100A11P31949 105 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms