RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CRYZL1O95825 349 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 IFNA5P01569 189 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 TNNC2P02585 160 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 TTRP02766 147 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 SERPINE1P05121 402 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 CCL4P13236 92 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 UCHL3P15374 230 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 MYL12AP19105 171 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 PPIBP23284 216 aaKnown RBP-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 NKX2-5P52952 324 aaPredicted RBP-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 DSCR4P56555 118 aaPredicted RBP-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 SPCS3P61009 180 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 EIF3IQ13347 325 aaKnown RBP-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 MED21Q13503 144 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 BATFQ16520 125 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 OCIAD2Q56VL3 154 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 SPOPLQ6IQ16 392 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 Q6Q795 121 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 Q6ZS92 163 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 ZCCHC23Q6ZST2 131 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 C20orf196Q8IYI0 205 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 CLDN22Q8N7P3 220 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 TMEM254Q8TBM7 123 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 DDI1Q8WTU0 396 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 POP5Q969H6 163 aaKnown RBP-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 RAB37Q96AX2 223 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 LYSMD1Q96S90 227 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 GPER1Q99527 375 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 COMMD5Q9GZQ3 224 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 FAM96AQ9H5X1 160 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 TAF9BQ9HBM6 251 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 TMEM138Q9NPI0 162 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 C14orf132Q9NPU4 83 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 PRTFDC1Q9NRG1 225 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 FGFR1OP2Q9NVK5 253 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 JPT1Q9UK76 154 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 FBXO5Q9UKT4 447 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 GUCA1BQ9UMX6 200 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 TNFSF18Q9UNG2 199 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 PRELID3BQ9Y3B1 194 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 ATP6V1DQ9Y5K8 247 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 PKDREJQ9NTG1 2253 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 KIAA1549LQ6ZVL6 1849 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 CSPG4Q6UVK1 2322 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 ANKRD31Q8N7Z5 1873 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 GVINP1Q7Z2Y8 2422 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 AKAP11Q9UKA4 1901 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 ERBINQ96RT1 1412 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 DOPEY1Q5JWR5 2465 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 NEBP20929 6669 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CEP164Q9UPV0 1460 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 COL6A3P12111 3177 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 ATRQ13535 2644 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 hCG_1818297A0A087WSY0 165 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 TRAV4A0A0B4J268 109 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 NBDYA0A0U1RRE5 68 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 C7orf71A4D174 169 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 A8MT66 165 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 H3BRM9 83 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 TMEM256-PLSCR3K7ERE1 68 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 PSMD12O00232 456 aaPredicted RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 KPNA3O00505 521 aaPredicted RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 PIRO00625 290 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 TAX1BP3O14907 124 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 SLC16A4O15374 487 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CYB5BO43169 146 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 NDUFB3O43676 98 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 PIAS1O75925 651 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 ERC2-IT1O76042 136 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 IFNA10P01566 189 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CD3DP04234 171 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 TCRBP04435 133 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 IFNA16P05015 189 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CALB1P05937 261 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CRHP06850 196 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CXCL1P09341 107 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CXCL8P10145 99 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CD79AP11912 226 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CYBAP13498 195 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 COX7CP15954 63 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 S100A4P26447 101 aaKnown RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CASP1P29466 404 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CASQ1P31415 396 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 ATP5G3P48201 142 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 INSL3P51460 131 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 PSME3P61289 254 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 RPL37AP61513 92 aaKnown RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 LSM6P62312 80 aaKnown RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 QRFPP83859 136 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 ZNF56Q15929 161 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 RRN3P1Q2M238 152 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 SPATA45Q537H7 98 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 Q5BKY6 102 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 GLYATL3Q5SZD4 288 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 FOXI2Q6ZQN5 318 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 TRAPPC6BQ86SZ2 158 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 OR6V1Q8N148 313 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 GDPD1Q8N9F7 314 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 OR5D14Q8NGL3 314 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 OR2T10Q8NGZ9 312 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms