RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 MRPL51Q4U2R6 128 aaKnown RBP2.86□□□□□ -1.95
USP44-208ENST00000552440 COL5A1-AS1Q5SY13 56 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 LCN15Q6UWW0 184 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 NTM-AS1Q6ZSK4 140 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 RPS19BP1Q86WX3 136 aaKnown RBP2.86□□□□□ -1.95
USP44-208ENST00000552440 C9orf62Q8N4C0 152 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 Q8N976 141 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 OR10AC1Q8NH08 325 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 WFDC5Q8TCV5 224 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 VGLL1Q99990 258 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 FAM60AQ9NP50 221 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 VCANP13611 3396 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 SLIT3O75094 1523 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 USP54Q70EL1 1684 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 QRICH2Q9H0J4 1663 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 SBF1O95248 1867 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 FER1L6Q2WGJ9 1857 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 LEUTXA8MZ59 168 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 UBFD1O14562 309 aaKnown RBP2.86□□□□□ -1.95
USP44-208ENST00000552440 LEPROTO15243 131 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 PTHLHP12272 177 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 HIST1H1DP16402 221 aaKnown RBP2.86□□□□□ -1.95
USP44-208ENST00000552440 DYNLT3P51808 116 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 ARPP19P56211 112 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 BTG2P78543 158 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 RPL18Q07020 188 aaKnown RBP2.86□□□□□ -1.95
USP44-208ENST00000552440 HSD52Q0P140 79 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 HSD17B12Q53GQ0 312 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 SPANXN3Q5MJ09 141 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 PCP2Q8IVA1 136 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 CIRBP-AS1Q8TBR5 109 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 RERGLQ9H628 205 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 LTBP1Q14766 1721 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 PPLO60437 1756 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 DENND4CQ5VZ89 1909 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 IGLV3-10A0A075B6K4 115 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 A0A087X0T9 212 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 TRBV27A0A0K0K1C4 114 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 CCDC179H3BU77 68 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 NDUFB3O43676 98 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 TCRAP04437 139 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 IGHV3-30-3P0DP02 117 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 RPL27AP46776 148 aaKnown RBP2.85□□□□□ -1.95
USP44-208ENST00000552440 RANBP2P49792 3224 aaKnown RBP2.85□□□□□ -1.95
USP44-208ENST00000552440 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 C22orf39Q6P5X5 142 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 TICRRQ7Z2Z1 1910 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 ADM2Q7Z4H4 148 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 N4BP2Q86UW6 1770 aaPredicted RBP2.85□□□□□ -1.95
USP44-208ENST00000552440 GKN2Q86XP6 184 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 DOCK4Q8N1I0 1966 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 APCDD1LQ8NCL9 501 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 KIAA1671Q9BY89 1806 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 WNK3Q9BYP7 1800 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 PLA2G2FQ9BZM2 168 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 GABARAPL1Q9H0R8 117 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 C11orf1Q9H5F2 150 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 SPTBN5Q9NRC6 3674 aaKnown RBP2.85□□□□□ -1.95
USP44-208ENST00000552440 CASP8AP2Q9UKL3 1982 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 SNX12Q9UMY4 172 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 DSCAML1Q8TD84 2053 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 PIKFYVEQ9Y2I7 2098 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 SCN2AQ99250 2005 aa2.85□□□□□ -1.95
USP44-208ENST00000552440 IGHV1-3A0A0C4DH29 117 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 OR2T8A6NH00 312 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 C19orf84I3L1E1 186 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 CDC42EP2O14613 210 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 NDUFB2O95178 105 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 C1QAP02745 245 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 RNASE4P34096 147 aaKnown RBP2.84□□□□□ -1.95
USP44-208ENST00000552440 ZNF93P35789 620 aaPredicted RBP2.84□□□□□ -1.95
USP44-208ENST00000552440 CRIP2P52943 208 aaPredicted RBP2.84□□□□□ -1.95
USP44-208ENST00000552440 SYCNQ0VAF6 134 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 ZNF767PQ75MW2 155 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 ZFP62Q8NB50 900 aaPredicted RBP2.84□□□□□ -1.95
USP44-208ENST00000552440 LINC00479Q96M42 142 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 YPEL2Q96QA6 119 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 XAGE1AQ9HD64 81 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 LINC00588Q9Y4M8 146 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 MPC1Q9Y5U8 109 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 ZNFX1Q9P2E3 1918 aaKnown RBP2.84□□□□□ -1.95
USP44-208ENST00000552440 NLRC5Q86WI3 1866 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 ATAD5Q96QE3 1844 aa2.84□□□□□ -1.95
USP44-208ENST00000552440 BRCA2P51587 3418 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 A0A0G2JMM0 328 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 IGHV3-64DA0A0J9YX35 117 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 A0A1W2PPB8 328 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 C7orf71A4D174 169 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 KIR3DP1A8MWS1 328 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 FNDC10F2Z333 226 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 HIST1H2BKO60814 126 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 IGKV1-16P04430 117 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 HIST1H2BJP06899 126 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 CCL3P10147 92 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 HLA-DMBP28068 263 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 BRS3P32247 399 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 TPPP2P59282 170 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 HIST1H4AP62805 103 aaKnown RBP2.84□□□□□ -1.96
USP44-208ENST00000552440 IZUMO2Q6UXV1 221 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 C16orf47Q6ZP98 133 aaPredicted RBP2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms