RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 DEFA1P59665 94 aa12.15□□□□□ -0.46
BRF1-219ENST00000551787 DEFA3P59666 94 aa12.15□□□□□ -0.46
BRF1-219ENST00000551787 PLP1P60201 277 aa12.15□□□□□ -0.46
BRF1-219ENST00000551787 NANOS2P60321 138 aaKnown RBP12.15□□□□□ -0.46
BRF1-219ENST00000551787 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.46
BRF1-219ENST00000551787 CSNK1G2-AS1Q8NCQ2 148 aa12.15□□□□□ -0.46
BRF1-219ENST00000551787 OR4B1Q8NGF8 309 aa12.15□□□□□ -0.46
BRF1-219ENST00000551787 MARVELD1Q9BSK0 173 aa12.15□□□□□ -0.46
BRF1-219ENST00000551787 SAV1Q9H4B6 383 aaPredicted RBP12.15□□□□□ -0.46
BRF1-219ENST00000551787 HLA-DRB4X5D2U9 266 aa12.15□□□□□ -0.46
BRF1-219ENST00000551787 SNRPCP09234 159 aaKnown RBP12.14□□□□□ -0.47
BRF1-219ENST00000551787 PRB4P10163 310 aaPredicted RBP12.14□□□□□ -0.47
BRF1-219ENST00000551787 S100A7P31151 101 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 LRRC37A5PQ49AS3 106 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 FOXI2Q6ZQN5 318 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 ZNF546Q86UE3 836 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 RNF182Q8N6D2 247 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 TMEM252Q8N6L7 170 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 ARV1Q9H2C2 271 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 LYRM2Q9NU23 88 aaPredicted RBP12.14□□□□□ -0.47
BRF1-219ENST00000551787 UQCC1Q9NVA1 299 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 RYR2Q92736 4967 aa12.14□□□□□ -0.47
BRF1-219ENST00000551787 TRAV8-2A0A0B4J237 113 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 IGHV4-28A0A0C4DH34 117 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 RBMY1A1P0DJD3 496 aaKnown RBP12.13□□□□□ -0.47
BRF1-219ENST00000551787 RBMY1CP0DJD4 496 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 ATF4P18848 351 aaPredicted RBP12.13□□□□□ -0.47
BRF1-219ENST00000551787 CAMLGP49069 296 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 MEOX2P50222 304 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 SULT1A1P50225 295 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 NUTF2P61970 127 aaKnown RBP12.13□□□□□ -0.47
BRF1-219ENST00000551787 RBMY1FQ15415 496 aaKnown RBP12.13□□□□□ -0.47
BRF1-219ENST00000551787 TMEM41BQ5BJD5 291 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 Q8NAQ8 132 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 C11orf45Q8TAV5 145 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 GPR82Q96P67 336 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 X6R8D5 127 aa12.13□□□□□ -0.47
BRF1-219ENST00000551787 UBE2L5PA0A1B0GUS4 154 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 SSNA1O43805 119 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 PRAF2O60831 178 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 RPL7P18124 248 aaKnown RBP12.12□□□□□ -0.47
BRF1-219ENST00000551787 FAM78BQ5VT40 261 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 MIC13Q5XKP0 118 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 EBLN2Q6P2I7 272 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 LINC00305Q7Z4B0 112 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 STX12Q86Y82 276 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 TMEM37Q8WXS4 190 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 SLC35B3Q9H1N7 401 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 RPRMQ9NS64 109 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 OR5AC2Q9NZP5 309 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 DNAH1Q9P2D7 4330 aa12.12□□□□□ -0.47
BRF1-219ENST00000551787 ZNF705EA8MWA4 302 aaPredicted RBP12.11□□□□□ -0.47
BRF1-219ENST00000551787 COX7A2P2O60397 106 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 ZNF705DP0CH99 300 aaPredicted RBP12.11□□□□□ -0.47
BRF1-219ENST00000551787 ZNF705BP0CI00 300 aaPredicted RBP12.11□□□□□ -0.47
BRF1-219ENST00000551787 HLA-DMBP28068 263 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 S100A11P31949 105 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 H2BFSP57053 126 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 NHLH2Q02577 135 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 BAXQ07812 192 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 RAB31Q13636 194 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 CEMP1Q6PRD7 247 aaPredicted RBP12.11□□□□□ -0.47
BRF1-219ENST00000551787 C11orf68Q9H3H3 251 aaKnown RBP12.11□□□□□ -0.47
BRF1-219ENST00000551787 WDR83OSQ9Y284 106 aa12.11□□□□□ -0.47
BRF1-219ENST00000551787 IGHV3OR16-12A0A075B7B8 117 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 A0A0J9YX75 114 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 H0YIZ8 118 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 RLN2P04090 185 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 PSG9Q00887 426 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 VWC2Q2TAL6 325 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 PXDC1Q5TGL8 231 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 MORN5Q5VZ52 161 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 LRRC20Q8TCA0 184 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
BRF1-219ENST00000551787 LYSTQ99698 3801 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 C1QTNF4Q9BXJ3 329 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 NMES1Q9C002 83 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 DNAJC4Q9NNZ3 241 aa12.1□□□□□ -0.47
BRF1-219ENST00000551787 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
BRF1-219ENST00000551787 TRAV5A0A0B4J249 113 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 NUPR2A6NF83 97 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 H3BTX0 84 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 JTBO76095 146 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 MIFP14174 115 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 FGF7P21781 194 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 HBG1P69891 147 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 HBG2P69892 147 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 C10orf113Q5VZT2 155 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 Q6ZRG5 221 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 S100A7AQ86SG5 101 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
BRF1-219ENST00000551787 E5RGE8 158 aa12.08□□□□□ -0.48
BRF1-219ENST00000551787 MRPS12O15235 138 aaKnown RBP12.08□□□□□ -0.48
BRF1-219ENST00000551787 PRR20EP86478 221 aa12.08□□□□□ -0.48
BRF1-219ENST00000551787 PRR20CP86479 221 aa12.08□□□□□ -0.48
BRF1-219ENST00000551787 PRR20DP86480 221 aa12.08□□□□□ -0.48
BRF1-219ENST00000551787 PRR20BP86481 221 aa12.08□□□□□ -0.48
BRF1-219ENST00000551787 PRR20AP86496 221 aa12.08□□□□□ -0.48
BRF1-219ENST00000551787 OPCMLQ14982 345 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms