RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZNF701M0R085 212 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-214ENST00000550893 RGS5O15539 181 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 CLN5O75503 358 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 PGAM2P15259 253 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 CRYBB3P26998 211 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 CD40LGP29965 261 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 CCR6P51684 374 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 PAX9P55771 341 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 ERVK-16P61578 105 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 IFITM3Q01628 133 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 DEFB135Q30KP9 77 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 PLET1Q6UQ28 207 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 H2BFWTQ7Z2G1 175 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 SGPP2Q8IWX5 399 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 CSNK1G2-AS1Q8NCQ2 148 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 OR52B4Q8NGK2 314 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 BORCS5Q969J3 196 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 IL22RA2Q969J5 263 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 MARC2Q969Z3 335 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 SAT2Q96F10 170 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-214ENST00000550893 TSC22D3Q99576 134 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 SPAG8Q99932 426 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-214ENST00000550893 RHPN1-AS1Q9BWJ2 59 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 SCRT1Q9BWW7 348 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 RBKSQ9H477 322 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 PUS1Q9Y606 427 aaKnown RBP eCLIP3.48□□□□□ -1.85
SCAF11-214ENST00000550893 A0A0B4J2A0 478 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 SMIM31A0A1B0GVY4 71 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 ZNF320A2RRD8 509 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 ADAP1O75689 374 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 SNAPC5O75971 98 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 DFFBO76075 338 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 DEFA4P12838 97 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 RND2P52198 227 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 AKR1C2P52895 323 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 SPCS3P61009 180 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 ZNF90Q03938 601 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 GUCA2BQ16661 112 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 FAM106AQ4KMX7 169 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 Q56UQ5 140 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 GDF5OSQ5U4N7 250 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 LPCAT3Q6P1A2 487 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 C16orf54Q6UWD8 224 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 ZNF600Q6ZNG1 722 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 Q8NAQ8 132 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 UBAC2Q8NBM4 344 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 OR1L6Q8NGR2 347 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 OR4A16Q8NH70 328 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 DYNLRB2Q8TF09 96 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 PINX1Q96BK5 328 aaKnown RBP3.47□□□□□ -1.85
SCAF11-214ENST00000550893 TXN2Q99757 166 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 PRRT1Q99946 306 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 C20orf24Q9BUV8 137 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 GGTLC1Q9BX51 225 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 MS4A6AQ9H2W1 248 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 COPZ2Q9P299 210 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 ZMAT5Q9UDW3 170 aaKnown RBP3.47□□□□□ -1.85
SCAF11-214ENST00000550893 RSL24D1Q9UHA3 163 aaKnown RBP3.47□□□□□ -1.85
SCAF11-214ENST00000550893 SHPKQ9UHJ6 478 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 TBC1D24Q9ULP9 559 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 RCL1Q9Y2P8 373 aaKnown RBP3.47□□□□□ -1.85
SCAF11-214ENST00000550893 UFC1Q9Y3C8 167 aa3.47□□□□□ -1.85
SCAF11-214ENST00000550893 FABP12A6NFH5 140 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 A8MTW9 85 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 MRPS12O15235 138 aaKnown RBP3.46□□□□□ -1.86
SCAF11-214ENST00000550893 B3GALNT1O75752 331 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 NDUFB6O95139 128 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 SFT2D2O95562 160 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 DHFRP00374 187 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 RBMY1A1P0DJD3 496 aaKnown RBP3.46□□□□□ -1.86
SCAF11-214ENST00000550893 RBMY1CP0DJD4 496 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 IL7P13232 177 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 RPL35AP18077 110 aaKnown RBP3.46□□□□□ -1.86
SCAF11-214ENST00000550893 NPY1RP25929 384 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 P2RY1P47900 373 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 UBE2MP61081 183 aaKnown RBP3.46□□□□□ -1.86
SCAF11-214ENST00000550893 IL15RAQ13261 267 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 GAMTQ14353 236 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 RBMY1FQ15415 496 aaKnown RBP3.46□□□□□ -1.86
SCAF11-214ENST00000550893 TRIM16LQ309B1 348 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 LEMD1Q68G75 181 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 TCF24Q7RTU0 167 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 SLC16A13Q7RTY0 426 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 LYG2Q86SG7 212 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 ZNF709Q8N972 641 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 CCDC71LQ8N9Z2 235 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 THAP8Q8NA92 274 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 OR4D5Q8NGN0 318 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 ZFAND1Q8TCF1 268 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 FKBP11Q9NYL4 201 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 CELA1Q9UNI1 258 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 TP53TG1Q9Y2A0 90 aa3.46□□□□□ -1.86
SCAF11-214ENST00000550893 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 IGKV3-7A0A075B6H7 116 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 LOC102724200A0A096LPH7 203 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-214ENST00000550893 TRAV2A0A0B4J234 112 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 TRAV8-2A0A0B4J237 113 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 KIR2DL5BA0A0G2JN68 375 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 KIR2DL5BA0A0G2JPC4 375 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 C9orf170A2RU37 121 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms