RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 RAB2AP61019 212 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 AKR1C8PQ5T2L2 129 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 EIF5AL1Q6IS14 154 aaKnown RBP9.11□□□□□ -0.95
HDAC7-226ENST00000547259 IL34Q6ZMJ4 242 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 LINC00305Q7Z4B0 112 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 GATAD1Q8WUU5 269 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 TMED6Q8WW62 240 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 TMEM37Q8WXS4 190 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 RNF2Q99496 336 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 RHPN1-AS1Q9BWJ2 59 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 SCRT1Q9BWW7 348 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 SLC25A39Q9BZJ4 359 aaPredicted RBP9.11□□□□□ -0.95
HDAC7-226ENST00000547259 SLC25A22Q9H936 323 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 SMPXQ9UHP9 88 aa9.11□□□□□ -0.95
HDAC7-226ENST00000547259 CHEK1O14757 476 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 C8orf88P0DMB2 117 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 M6PRP20645 277 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 TMEM41BQ5BJD5 291 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 FAM78BQ5VT40 261 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 FAM122CQ6P4D5 195 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 ADAMTSL5Q6ZMM2 481 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 SBSPONQ8IVN8 264 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 OR10G4Q8NGN3 311 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 OR10G9Q8NGN4 311 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 OR10G7Q8NGN6 311 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 SHANK2-AS3Q9BTD1 123 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 MRPL32Q9BYC8 188 aaKnown RBP9.1□□□□□ -0.95
HDAC7-226ENST00000547259 VSIRQ9H7M9 311 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 RNF24Q9Y225 148 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 SELENOKQ9Y6D0 94 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 U3KQE9 123 aa9.1□□□□□ -0.95
HDAC7-226ENST00000547259 DYNC2H1Q8NCM8 4307 aaKnown RBP9.09□□□□□ -0.95
HDAC7-226ENST00000547259 A0A1W2PPV4 95 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 ZNF98A6NK75 572 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 BUB3O43684 328 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 GP9P14770 177 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 RHOBP62745 196 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 LEMD1Q68G75 181 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 C16orf54Q6UWD8 224 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 SIGLEC8Q9NYZ4 499 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 TECRQ9NZ01 308 aaKnown RBP9.09□□□□□ -0.95
HDAC7-226ENST00000547259 MLXQ9UH92 298 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 FUT9Q9Y231 359 aa9.09□□□□□ -0.95
HDAC7-226ENST00000547259 HUWE1Q7Z6Z7 4374 aaKnown RBP9.08□□□□□ -0.96
HDAC7-226ENST00000547259 FRMD6-AS1P0C7T7 363 aa9.08□□□□□ -0.96
HDAC7-226ENST00000547259 CDC34P49427 236 aaPredicted RBP9.08□□□□□ -0.96
HDAC7-226ENST00000547259 C1orf194Q5T5A4 169 aa9.08□□□□□ -0.96
HDAC7-226ENST00000547259 MORN5Q5VZ52 161 aa9.08□□□□□ -0.96
HDAC7-226ENST00000547259 SPATA31B1PQ5VZV4 182 aa9.08□□□□□ -0.96
HDAC7-226ENST00000547259 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
HDAC7-226ENST00000547259 TCF24Q7RTU0 167 aa9.08□□□□□ -0.96
HDAC7-226ENST00000547259 OR8I2Q8N0Y5 310 aa9.08□□□□□ -0.96
HDAC7-226ENST00000547259 SEPSECSQ9HD40 501 aaKnown RBP9.08□□□□□ -0.96
HDAC7-226ENST00000547259 TRAV5A0A0B4J249 113 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 LCE6AA0A183 80 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 HELTA6NFD8 242 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 UMAD1C9J7I0 102 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 IGLV1-51P01701 117 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 RPL7P18124 248 aaKnown RBP9.07□□□□□ -0.96
HDAC7-226ENST00000547259 GALR1P47211 349 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 TAS2R45P59539 299 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 RPL11P62913 178 aaKnown RBP9.07□□□□□ -0.96
HDAC7-226ENST00000547259 DEFB114Q30KQ6 69 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 KHDC3LQ587J8 217 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 ALKAL2Q6UX46 152 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 SIGLEC15Q6ZMC9 328 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 RBPMS2Q6ZRY4 209 aaKnown RBP9.07□□□□□ -0.96
HDAC7-226ENST00000547259 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 PHYHIPLQ96FC7 376 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 GPR82Q96P67 336 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 ACTR3CQ9C0K3 210 aaPredicted RBP9.07□□□□□ -0.96
HDAC7-226ENST00000547259 RPRMQ9NS64 109 aa9.07□□□□□ -0.96
HDAC7-226ENST00000547259 IGKV3-7A0A075B6H7 116 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 A8MZ25 164 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 EIF3GO75821 320 aaKnown RBP eCLIP9.06□□□□□ -0.96
HDAC7-226ENST00000547259 CD5P06127 495 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 ATF4P18848 351 aaPredicted RBP9.06□□□□□ -0.96
HDAC7-226ENST00000547259 CD300EQ496F6 205 aaPredicted RBP9.06□□□□□ -0.96
HDAC7-226ENST00000547259 LCN12Q6JVE5 192 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 BPIFA4PQ86YQ2 179 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 TMEM61Q8N0U2 210 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
HDAC7-226ENST00000547259 OR2K2Q8NGT1 345 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 FAM213BQ8TBF2 198 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 SLC25A2Q9BXI2 301 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
HDAC7-226ENST00000547259 LYSTQ99698 3801 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 TRAV25A0A0B4J276 109 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 CTXND1A0A1B0GTU2 59 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 HMGB3O15347 200 aaKnown RBP9.05□□□□□ -0.96
HDAC7-226ENST00000547259 OR7C2O60412 319 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 SULT1A2P50226 295 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 RAB5CP51148 216 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 FAM74A1Q5RGS3 127 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 DPPA3Q6W0C5 159 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 STXBP6Q8NFX7 210 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 RAB24Q969Q5 203 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 TM2D3Q9BRN9 247 aa9.05□□□□□ -0.96
HDAC7-226ENST00000547259 IZUMO1RA6ND01 250 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms