RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TWIST1Q15672 202 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 ANXA2RQ3ZCQ2 193 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 CENPWQ5EE01 88 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 HRCT1Q6UXD1 115 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 Q6ZSR3 168 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 LINC00643Q86TS7 51 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 MARCH3Q86UD3 253 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 GTSCR1Q86UQ5 136 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 SLC25A45Q8N413 288 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 RAB42Q8N4Z0 105 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 POM121L12Q8N7R1 296 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 WDR31Q8NA23 367 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF414Q96IQ9 312 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 PRR25Q96S07 402 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 TRGV9Q99603 122 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 SRSF8Q9BRL6 282 aaKnown RBP3.45□□□□□ -1.86
SNHG1-219ENST00000542112 CACNG5Q9UF02 275 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 PYGO1Q9Y3Y4 419 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 BRWD1Q9NSI6 2320 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 CEP350Q5VT06 3117 aa3.45□□□□□ -1.86
SNHG1-219ENST00000542112 NUP210Q8TEM1 1887 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-219ENST00000542112 MDC1Q14676 2089 aaKnown RBP3.45□□□□□ -1.86
SNHG1-219ENST00000542112 SMIM26A0A096LP01 95 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 IGLV1-36A0A0B4J1U3 117 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 TRAV17A0A0B4J275 112 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 A0A1B0GTH9 108 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 OOSP1A8MZH6 123 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 H3BT86 120 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 MGST3O14880 152 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 ENSAO43768 121 aaKnown RBP3.44□□□□□ -1.86
SNHG1-219ENST00000542112 SLC25A20O43772 301 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 IGHG2P01859 326 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 HBDP02042 147 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 CD7P09564 240 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 COX6A1P12074 109 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 B4GALT1P15291 398 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 EDN2P20800 178 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 CD52P31358 61 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 PFN2P35080 140 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 FOXA3P55318 350 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-219ENST00000542112 UBE2L3P68036 154 aaKnown RBP3.44□□□□□ -1.86
SNHG1-219ENST00000542112 CCL8P80075 99 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 CST6Q15828 149 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 FAM201AQ5SY85 155 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 HMGN2P46Q86SG4 172 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 SFTPA2Q8IWL1 248 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 SFTPA1Q8IWL2 248 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 C11orf53Q8IXP5 236 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 DRAM1Q8N682 238 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 LINC00477Q96M19 166 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF488Q96MN9 340 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 ODF3Q96PU9 254 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 PLA2G2FQ9BZM2 168 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 FAM60AQ9NP50 221 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF492Q9P255 531 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 TP73-AS1Q9UF72 201 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 EPDR1Q9UM22 224 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 SERP1Q9Y6X1 66 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 CENPFP49454 3210 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 LRRK1Q38SD2 2015 aa3.44□□□□□ -1.86
SNHG1-219ENST00000542112 DOCK9Q9BZ29 2069 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 TRBV7-3A0A075B6L6 115 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 TRAV8-1A0A0A6YYK1 113 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 FAM236AA0A1B0GUQ0 79 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 FAM236BA0A1B0GV22 79 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 RBAKDNA6NC62 111 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 LINC01546A6NGU7 62 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 C15orf61A6NNL5 157 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 NCBP2LA6PVI3 153 aaKnown RBP3.43□□□□□ -1.86
SNHG1-219ENST00000542112 NPIPB11E5RHQ5 1161 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 H7C1H1 209 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 CHEK1O14757 476 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 FCGR3BO75015 233 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 WISP2O76076 250 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 ZFAND5O76080 213 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 CLDN14O95500 239 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 LIFP15018 202 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 PSMB2P49721 201 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 SSR4P51571 173 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 UBE2D1P51668 147 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 FXYD4P59646 89 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 POLR2LP62875 67 aaKnown RBP3.43□□□□□ -1.86
SNHG1-219ENST00000542112 KISS1Q15726 138 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF672Q499Z4 452 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-219ENST00000542112 TMEM52BQ4KMG9 183 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 CLLU1OSQ5K130 101 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 CD164L2Q6UWJ8 174 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF493Q6ZR52 646 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF441Q8N8Z8 693 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 RFESDQ8TAC1 157 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 GATAD1Q8WUU5 269 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 LINC00476Q8WZB0 136 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 CNRIP1Q96F85 164 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-219ENST00000542112 IGF2BP2-AS1Q96M15 143 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 C18orf15Q96N68 181 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 HIST1H4GQ99525 98 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 CHCHD5Q9BSY4 110 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 SHANK2-AS3Q9BTD1 123 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 DYNLRB1Q9NP97 96 aa3.43□□□□□ -1.86
SNHG1-219ENST00000542112 OCIAD1Q9NX40 245 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms