RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SMIM3Q9BZL3 60 aa14□□□□□ -0.17
VPS33A-205ENST00000541169 ISLRO14498 428 aa13.99□□□□□ -0.17
VPS33A-205ENST00000541169 FRMD6-AS1P0C7T7 363 aa13.99□□□□□ -0.17
VPS33A-205ENST00000541169 ATF4P18848 351 aaPredicted RBP13.99□□□□□ -0.17
VPS33A-205ENST00000541169 ODF3L2Q3SX64 289 aa13.99□□□□□ -0.17
VPS33A-205ENST00000541169 WFDC3Q8IUB2 231 aa13.99□□□□□ -0.17
VPS33A-205ENST00000541169 TMEM37Q8WXS4 190 aa13.99□□□□□ -0.17
VPS33A-205ENST00000541169 UHRF2Q96PU4 802 aa13.99□□□□□ -0.17
VPS33A-205ENST00000541169 SCRT1Q9BWW7 348 aa13.99□□□□□ -0.17
VPS33A-205ENST00000541169 SLC25A32Q9H2D1 315 aa13.99□□□□□ -0.17
VPS33A-205ENST00000541169 RNF222A6NCQ9 220 aa13.98□□□□□ -0.17
VPS33A-205ENST00000541169 G3V3Q6 166 aa13.98□□□□□ -0.17
VPS33A-205ENST00000541169 PSMB3P49720 205 aa13.98□□□□□ -0.17
VPS33A-205ENST00000541169 TCTE3Q8IZS6 198 aa13.98□□□□□ -0.17
VPS33A-205ENST00000541169 GNPNAT1Q96EK6 184 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-205ENST00000541169 MRPL32Q9BYC8 188 aaKnown RBP13.98□□□□□ -0.17
VPS33A-205ENST00000541169 MFFQ9GZY8 342 aa13.98□□□□□ -0.17
VPS33A-205ENST00000541169 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
VPS33A-205ENST00000541169 MAP6D1Q9H9H5 199 aa13.98□□□□□ -0.17
VPS33A-205ENST00000541169 ARPC5O15511 151 aa13.97□□□□□ -0.17
VPS33A-205ENST00000541169 JTBO76095 146 aa13.97□□□□□ -0.17
VPS33A-205ENST00000541169 CXCL2P19875 107 aa13.97□□□□□ -0.17
VPS33A-205ENST00000541169 GUK1Q16774 197 aa13.97□□□□□ -0.17
VPS33A-205ENST00000541169 DEFB125Q8N687 156 aa13.97□□□□□ -0.17
VPS33A-205ENST00000541169 PSMG3Q9BT73 122 aaPredicted RBP13.97□□□□□ -0.17
VPS33A-205ENST00000541169 A0A087X0K7 114 aa13.96□□□□□ -0.17
VPS33A-205ENST00000541169 A0A0D9SG52 128 aa13.96□□□□□ -0.17
VPS33A-205ENST00000541169 SERF2P84101 59 aa13.96□□□□□ -0.17
VPS33A-205ENST00000541169 RSG1Q9BU20 258 aa13.96□□□□□ -0.17
VPS33A-205ENST00000541169 WFDC1Q9HC57 220 aa13.96□□□□□ -0.17
VPS33A-205ENST00000541169 CLEC5AQ9NY25 188 aa13.96□□□□□ -0.17
VPS33A-205ENST00000541169 UBQLN2Q9UHD9 624 aa13.96□□□□□ -0.17
VPS33A-205ENST00000541169 LOC102724200A0A096LPH7 203 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-205ENST00000541169 KIR2DL5BA0A0G2JN68 375 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 KIR2DL5BA0A0G2JPC4 375 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 MBP02144 154 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 APOC4P55056 127 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 ACOT6Q3I5F7 207 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-205ENST00000541169 SPATA31B1PQ5VZV4 182 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 LEMD1Q68G75 181 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 LINC00322Q6ZN03 302 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-205ENST00000541169 KIR2DL5AQ8N109 375 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 KIR2DL5BQ8NHK3 375 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 TMEM14CQ9P0S9 112 aa13.95□□□□□ -0.18
VPS33A-205ENST00000541169 DEFB131AP59861 70 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 RHOBP62745 196 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 FFAR4Q5NUL3 377 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 FAM78BQ5VT40 261 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 LCN15Q6UWW0 184 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 AKAP14Q86UN6 197 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 OR2G3Q8NGZ4 309 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 ST6GAL2Q96JF0 529 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 C16orf92Q96LL3 132 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 HRH4Q9H3N8 390 aa13.94□□□□□ -0.18
VPS33A-205ENST00000541169 UBE2CO00762 179 aa13.93□□□□□ -0.18
VPS33A-205ENST00000541169 SOCS3O14543 225 aa13.93□□□□□ -0.18
VPS33A-205ENST00000541169 ZNF688P0C7X2 276 aa13.93□□□□□ -0.18
VPS33A-205ENST00000541169 M6PRP20645 277 aa13.93□□□□□ -0.18
VPS33A-205ENST00000541169 TAS2R45P59539 299 aa13.93□□□□□ -0.18
VPS33A-205ENST00000541169 KCNRGQ8N5I3 272 aa13.93□□□□□ -0.18
VPS33A-205ENST00000541169 SLC50A1Q9BRV3 221 aa13.93□□□□□ -0.18
VPS33A-205ENST00000541169 ZNF253O75346 499 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 EIF5AP63241 154 aaKnown RBP13.92□□□□□ -0.18
VPS33A-205ENST00000541169 PSMG4Q5JS54 123 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 LRRC20Q8TCA0 184 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 ARPC5LQ9BPX5 153 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 WFDC10AQ9H1F0 79 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 ZMAT4Q9H898 229 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 RPRMQ9NS64 109 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 FUT9Q9Y231 359 aa13.92□□□□□ -0.18
VPS33A-205ENST00000541169 RBMY1BA6NDE4 496 aaKnown RBP13.91□□□□□ -0.18
VPS33A-205ENST00000541169 RBMY1EA6NEQ0 496 aaKnown RBP13.91□□□□□ -0.18
VPS33A-205ENST00000541169 MRPS12O15235 138 aaKnown RBP13.91□□□□□ -0.18
VPS33A-205ENST00000541169 RBMY1DP0C7P1 496 aaKnown RBP13.91□□□□□ -0.18
VPS33A-205ENST00000541169 PDE6HQ13956 83 aa13.91□□□□□ -0.18
VPS33A-205ENST00000541169 TMEM41BQ5BJD5 291 aa13.91□□□□□ -0.18
VPS33A-205ENST00000541169 APRG1Q8IVJ8 170 aa13.91□□□□□ -0.18
VPS33A-205ENST00000541169 STHQ8IWL8 128 aa13.91□□□□□ -0.18
VPS33A-205ENST00000541169 HSD17B11Q8NBQ5 300 aa13.91□□□□□ -0.18
VPS33A-205ENST00000541169 HYLS1Q96M11 299 aa13.91□□□□□ -0.18
VPS33A-205ENST00000541169 A0A1W2PPV4 95 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 KANTRA0A1W2PQU2 76 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 SMLR1H3BR10 107 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 C1QBP02746 253 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 IGLC2P0DOY2 106 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 HAGHQ16775 308 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 KHDC3LQ587J8 217 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 FAM24BQ8N5W8 94 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 CLUHP3Q96NS8 147 aa13.9□□□□□ -0.18
VPS33A-205ENST00000541169 HIST1H1EP10412 219 aaKnown RBP13.89□□□□□ -0.19
VPS33A-205ENST00000541169 SPP1P10451 314 aa13.89□□□□□ -0.19
VPS33A-205ENST00000541169 ATP6V0CP27449 155 aa13.89□□□□□ -0.19
VPS33A-205ENST00000541169 NUTF2P61970 127 aaKnown RBP13.89□□□□□ -0.19
VPS33A-205ENST00000541169 RPL7L1Q6DKI1 246 aaKnown RBP13.89□□□□□ -0.19
VPS33A-205ENST00000541169 MORN3Q6PF18 240 aaPredicted RBP13.89□□□□□ -0.19
VPS33A-205ENST00000541169 FOXI2Q6ZQN5 318 aa13.89□□□□□ -0.19
VPS33A-205ENST00000541169 SBSPONQ8IVN8 264 aa13.89□□□□□ -0.19
VPS33A-205ENST00000541169 OR11H4Q8NGC9 324 aa13.89□□□□□ -0.19
VPS33A-205ENST00000541169 LINC00052Q96N35 136 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms