RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 SMIM4Q8WVI0 70 aa13.9□□□□□ -0.18
LPCAT3-210ENST00000540090 CLINT1Q14677 625 aa13.89□□□□□ -0.19
LPCAT3-210ENST00000540090 OR1S1Q8NH92 325 aa13.89□□□□□ -0.19
LPCAT3-210ENST00000540090 GPR82Q96P67 336 aa13.89□□□□□ -0.19
LPCAT3-210ENST00000540090 LINC01587Q99440 93 aa13.89□□□□□ -0.19
LPCAT3-210ENST00000540090 TRAV12-2A0A075B6T6 113 aa13.88□□□□□ -0.19
LPCAT3-210ENST00000540090 PITX3O75364 302 aa13.88□□□□□ -0.19
LPCAT3-210ENST00000540090 AKR1C4P17516 323 aa13.88□□□□□ -0.19
LPCAT3-210ENST00000540090 TAS2R60P59551 318 aa13.88□□□□□ -0.19
LPCAT3-210ENST00000540090 KRTAP10-2P60368 255 aa13.88□□□□□ -0.19
LPCAT3-210ENST00000540090 SCGB3A2Q96PL1 93 aa13.88□□□□□ -0.19
LPCAT3-210ENST00000540090 NAA50Q9GZZ1 169 aaKnown RBP13.88□□□□□ -0.19
LPCAT3-210ENST00000540090 FAT1Q14517 4588 aa13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 BOLA2-SMG1P6H3BVE0 249 aa13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 ORM2P19652 201 aa13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 BTF3P20290 206 aaKnown RBP13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 TMEM182Q6ZP80 229 aaPredicted RBP13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 CLVS1Q8IUQ0 354 aaPredicted RBP13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 TMEM256Q8N2U0 113 aa13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 RNF182Q8N6D2 247 aa13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 KRTAP1-5Q9BYS1 174 aa13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 SLC25A39Q9BZJ4 359 aaPredicted RBP13.87□□□□□ -0.19
LPCAT3-210ENST00000540090 CTDSPLO15194 276 aa13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 GATA2P23769 480 aaPredicted RBP13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 S100A7P31151 101 aa13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 SRPXP78539 464 aa13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 TTC32Q5I0X7 151 aa13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 BPIFCQ8NFQ6 507 aa13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 C16orf74Q96GX8 76 aa13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 Q9H3A6 140 aa13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 SCP2D1Q9UJQ7 156 aa13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 TIMM8BQ9Y5J9 83 aaPredicted RBP13.86□□□□□ -0.19
LPCAT3-210ENST00000540090 PRSS46E5RG02 174 aa13.85□□□□□ -0.19
LPCAT3-210ENST00000540090 CTDSP2O14595 271 aa13.85□□□□□ -0.19
LPCAT3-210ENST00000540090 RGS5O15539 181 aa13.85□□□□□ -0.19
LPCAT3-210ENST00000540090 IAPPP10997 89 aa13.85□□□□□ -0.19
LPCAT3-210ENST00000540090 TMEM147Q9BVK8 224 aa13.85□□□□□ -0.19
LPCAT3-210ENST00000540090 PAIP2BQ9ULR5 123 aaKnown RBP13.85□□□□□ -0.19
LPCAT3-210ENST00000540090 ANKRD20A5PA0PJZ0 165 aa13.84□□□□□ -0.19
LPCAT3-210ENST00000540090 ANXA3P12429 323 aa13.84□□□□□ -0.19
LPCAT3-210ENST00000540090 FGL1Q08830 312 aa13.84□□□□□ -0.19
LPCAT3-210ENST00000540090 ZNF493Q6ZR52 646 aa13.84□□□□□ -0.19
LPCAT3-210ENST00000540090 TMEM144Q7Z5S9 345 aa13.84□□□□□ -0.19
LPCAT3-210ENST00000540090 ZNF738Q8NE65 137 aa13.84□□□□□ -0.19
LPCAT3-210ENST00000540090 OR8A1Q8NGG7 326 aa13.84□□□□□ -0.19
LPCAT3-210ENST00000540090 ZNF503Q96F45 646 aa13.84□□□□□ -0.19
LPCAT3-210ENST00000540090 PIGBOS1A0A0B4J2F0 54 aa13.83□□□□□ -0.2
LPCAT3-210ENST00000540090 A0A1W2PPQ1 181 aa13.83□□□□□ -0.2
LPCAT3-210ENST00000540090 HTN1P15515 57 aa13.83□□□□□ -0.2
LPCAT3-210ENST00000540090 RHOBP62745 196 aa13.83□□□□□ -0.2
LPCAT3-210ENST00000540090 GNPNAT1Q96EK6 184 aaPredicted RBP13.83□□□□□ -0.2
LPCAT3-210ENST00000540090 UHRF2Q96PU4 802 aa13.83□□□□□ -0.2
LPCAT3-210ENST00000540090 UPK3BQ9BT76 320 aa13.83□□□□□ -0.2
LPCAT3-210ENST00000540090 NOP10Q9NPE3 64 aaKnown RBP13.83□□□□□ -0.2
LPCAT3-210ENST00000540090 DUXBA0A1W2PPF3 345 aa13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 SLC25A6P12236 298 aa13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 RPP30P78346 268 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 HIST1H1AQ02539 215 aaPredicted RBP13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 OR5I1Q13606 314 aa13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 OR10J6PQ8NGY7 276 aa13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 RNASE8Q8TDE3 154 aaKnown RBP13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 RXFP4Q8TDU9 374 aa13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 CIB3Q96Q77 187 aaPredicted RBP13.82□□□□□ -0.2
LPCAT3-210ENST00000540090 TRAV26-1A0A087WT03 109 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 H3BRN7 92 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 MED6O75586 246 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 RPL7P18124 248 aaKnown RBP13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 CXCL3P19876 107 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 M6PRP20645 277 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 IL18Q14116 193 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 ESRGQ1W209 222 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 LINC00612Q8N6U2 182 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 TMEM263Q8WUH6 116 aaKnown RBP13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 SHANK2-AS3Q9BTD1 123 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 PPP1R14DQ9NXH3 145 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 RABL2AQ9UBK7 228 aaPredicted RBP13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
LPCAT3-210ENST00000540090 EPM2AB3EWF7 344 aa13.8□□□□□ -0.2
LPCAT3-210ENST00000540090 DIRAS2Q96HU8 199 aa13.8□□□□□ -0.2
LPCAT3-210ENST00000540090 MCUBQ9NWR8 336 aa13.8□□□□□ -0.2
LPCAT3-210ENST00000540090 ZNF701M0R085 212 aaPredicted RBP13.79□□□□□ -0.2
LPCAT3-210ENST00000540090 CDKN1BP46527 198 aa13.79□□□□□ -0.2
LPCAT3-210ENST00000540090 PSG3Q16557 428 aa13.79□□□□□ -0.2
LPCAT3-210ENST00000540090 LRTM2Q8N967 370 aa13.79□□□□□ -0.2
LPCAT3-210ENST00000540090 A0A087X0K7 114 aa13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 H7BYZ3 331 aa13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 WRBO00258 174 aa13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 SYNGR2O43760 224 aa13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 RAP2BP61225 183 aa13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 DLK1P80370 383 aa13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 AKR1C1Q04828 323 aa13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 HIGD1AQ9Y241 93 aa13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 MRPS16Q9Y3D3 137 aaKnown RBP13.78□□□□□ -0.2
LPCAT3-210ENST00000540090 A0A0J9YY99 117 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 H3BNG1 76 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 HYPMO75409 117 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 ADAP1O75689 374 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 IL5P05113 134 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 HOXA5P20719 270 aa13.77□□□□□ -0.21
LPCAT3-210ENST00000540090 PLP1P60201 277 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms