RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PSMG4Q5JS54 123 aa16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 KIR2DL5AQ8N109 375 aa16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 KIR2DL5BQ8NHK3 375 aa16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 TMEM37Q8WXS4 190 aa16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 GPR82Q96P67 336 aa16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 GIPP09681 153 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-204ENST00000535399 SNRPD3P62318 126 aaKnown RBP16.74■□□□□ 0.27
SFSWAP-204ENST00000535399 S100A7AQ86SG5 101 aa16.74■□□□□ 0.27
SFSWAP-204ENST00000535399 THAP6Q8TBB0 222 aa16.74■□□□□ 0.27
SFSWAP-204ENST00000535399 RSG1Q9BU20 258 aa16.74■□□□□ 0.27
SFSWAP-204ENST00000535399 ELOA3CA0A087WX78 387 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-204ENST00000535399 KNCNA6PVL3 124 aa16.73■□□□□ 0.27
SFSWAP-204ENST00000535399 COX7A2P2O60397 106 aa16.73■□□□□ 0.27
SFSWAP-204ENST00000535399 B2MP61769 119 aa16.73■□□□□ 0.27
SFSWAP-204ENST00000535399 ASB13Q8WXK3 278 aa16.73■□□□□ 0.27
SFSWAP-204ENST00000535399 NPCDR1Q9BY65 106 aa16.73■□□□□ 0.27
SFSWAP-204ENST00000535399 SLC39A9Q9NUM3 307 aa16.73■□□□□ 0.27
SFSWAP-204ENST00000535399 PXMP4Q9Y6I8 212 aa16.73■□□□□ 0.27
SFSWAP-204ENST00000535399 UBE2CO00762 179 aa16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 RPL7P18124 248 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 Q5BKY6 102 aa16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 Q6ZRG5 221 aa16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 LINC00305Q7Z4B0 112 aa16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 WWC2-AS2Q96NR7 200 aa16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 ATP5SQ99766 215 aa16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 DNAJC4Q9NNZ3 241 aa16.72■□□□□ 0.27
SFSWAP-204ENST00000535399 PSMB3P49720 205 aa16.71■□□□□ 0.27
SFSWAP-204ENST00000535399 MEOX2P50222 304 aa16.71■□□□□ 0.27
SFSWAP-204ENST00000535399 MORN5Q5VZ52 161 aa16.71■□□□□ 0.27
SFSWAP-204ENST00000535399 C10orf113Q5VZT2 155 aa16.71■□□□□ 0.27
SFSWAP-204ENST00000535399 STHQ8IWL8 128 aa16.71■□□□□ 0.27
SFSWAP-204ENST00000535399 WDR61Q9GZS3 305 aaKnown RBP16.71■□□□□ 0.27
SFSWAP-204ENST00000535399 CSTL1Q9H114 145 aa16.71■□□□□ 0.27
SFSWAP-204ENST00000535399 ISLRO14498 428 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 MRPS12O15235 138 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 ID1P41134 155 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 ACTL10Q5JWF8 245 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 SAMD13Q5VXD3 122 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 Q6ZWC4 215 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 TRPT1Q86TN4 253 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 OR1L4Q8NGR5 311 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 OVOL2Q9BRP0 275 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 SMIM3Q9BZL3 60 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 RNF24Q9Y225 148 aa16.7■□□□□ 0.26
SFSWAP-204ENST00000535399 FGL1Q08830 312 aa16.69■□□□□ 0.26
SFSWAP-204ENST00000535399 LINC00052Q96N35 136 aa16.69■□□□□ 0.26
SFSWAP-204ENST00000535399 WFDC1Q9HC57 220 aa16.69■□□□□ 0.26
SFSWAP-204ENST00000535399 A0A087X0K7 114 aa16.68■□□□□ 0.26
SFSWAP-204ENST00000535399 ATF4P18848 351 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-204ENST00000535399 DEFB135Q30KP9 77 aa16.68■□□□□ 0.26
SFSWAP-204ENST00000535399 C16orf92Q96LL3 132 aa16.68■□□□□ 0.26
SFSWAP-204ENST00000535399 C20orf173Q96LM9 149 aa16.68■□□□□ 0.26
SFSWAP-204ENST00000535399 PFDN5Q99471 154 aa16.68■□□□□ 0.26
SFSWAP-204ENST00000535399 TP53TG1Q9Y2A0 90 aa16.68■□□□□ 0.26
SFSWAP-204ENST00000535399 DEFB1P60022 68 aa16.67■□□□□ 0.26
SFSWAP-204ENST00000535399 EDA2RQ9HAV5 297 aa16.67■□□□□ 0.26
SFSWAP-204ENST00000535399 TRAV8-2A0A0B4J237 113 aa16.66■□□□□ 0.26
SFSWAP-204ENST00000535399 H3BMM0 161 aa16.66■□□□□ 0.26
SFSWAP-204ENST00000535399 GCSAMLQ5JQS6 135 aa16.66■□□□□ 0.26
SFSWAP-204ENST00000535399 GATAD1Q8WUU5 269 aa16.66■□□□□ 0.26
SFSWAP-204ENST00000535399 RNF183Q96D59 192 aa16.66■□□□□ 0.26
SFSWAP-204ENST00000535399 AQP10Q96PS8 301 aa16.66■□□□□ 0.26
SFSWAP-204ENST00000535399 TRAV5A0A0B4J249 113 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 SPRY2O43597 315 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 IFNA5P01569 189 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 GIG44P09565 113 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 HLA-DRB4P13762 266 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 GDF5OSQ5U4N7 250 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 ZNF709Q8N972 641 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 OR2T35Q8NGX2 323 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 PARD6GQ9BYG4 376 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 KCNIP2Q9NS61 270 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 HLA-DRB4X5D2U9 266 aa16.65■□□□□ 0.26
SFSWAP-204ENST00000535399 G3V3Q6 166 aa16.64■□□□□ 0.25
SFSWAP-204ENST00000535399 CA1P00915 261 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-204ENST00000535399 SPP1P10451 314 aa16.64■□□□□ 0.25
SFSWAP-204ENST00000535399 IGFL4Q6B9Z1 124 aa16.64■□□□□ 0.25
SFSWAP-204ENST00000535399 FOXI2Q6ZQN5 318 aa16.64■□□□□ 0.25
SFSWAP-204ENST00000535399 BPIFA4PQ86YQ2 179 aa16.64■□□□□ 0.25
SFSWAP-204ENST00000535399 SAV1Q9H4B6 383 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-204ENST00000535399 AGRNO00468 2067 aa16.64■□□□□ 0.25
SFSWAP-204ENST00000535399 DNAH7Q8WXX0 4024 aa16.63■□□□□ 0.25
SFSWAP-204ENST00000535399 MORN3Q6PF18 240 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-204ENST00000535399 SCGB1C1Q8TD33 95 aa16.63■□□□□ 0.25
SFSWAP-204ENST00000535399 C17orf112F2Z3M2 114 aa16.62■□□□□ 0.25
SFSWAP-204ENST00000535399 IGLC2P0DOY2 106 aa16.62■□□□□ 0.25
SFSWAP-204ENST00000535399 C4BPBP20851 252 aa16.62■□□□□ 0.25
SFSWAP-204ENST00000535399 RPRMQ9NS64 109 aa16.62■□□□□ 0.25
SFSWAP-204ENST00000535399 FXYD6-FXYD2A0A087WZ82 144 aa16.61■□□□□ 0.25
SFSWAP-204ENST00000535399 F6UB75 175 aa16.61■□□□□ 0.25
SFSWAP-204ENST00000535399 SNRPCP09234 159 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-204ENST00000535399 CXCL2P19875 107 aa16.61■□□□□ 0.25
SFSWAP-204ENST00000535399 RNF182Q8N6D2 247 aa16.61■□□□□ 0.25
SFSWAP-204ENST00000535399 RNF222A6NCQ9 220 aa16.6■□□□□ 0.25
SFSWAP-204ENST00000535399 H3BQ15 152 aa16.6■□□□□ 0.25
SFSWAP-204ENST00000535399 HLA-DMBP28068 263 aa16.6■□□□□ 0.25
SFSWAP-204ENST00000535399 SPATA31B1PQ5VZV4 182 aa16.6■□□□□ 0.25
SFSWAP-204ENST00000535399 HRH4Q9H3N8 390 aa16.6■□□□□ 0.25
SFSWAP-204ENST00000535399 TNFSF18Q9UNG2 199 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms