RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 PCP4L1A6NKN8 68 aa15.66■□□□□ 0.1
TNFRSF1A-205ENST00000534885 BMPR1BO00238 502 aa15.66■□□□□ 0.1
TNFRSF1A-205ENST00000534885 CRYBA1P05813 215 aa15.66■□□□□ 0.1
TNFRSF1A-205ENST00000534885 KLHDC1Q8N7A1 406 aa15.66■□□□□ 0.1
TNFRSF1A-205ENST00000534885 ZNF98A6NK75 572 aa15.65■□□□□ 0.1
TNFRSF1A-205ENST00000534885 STXBP6Q8NFX7 210 aa15.65■□□□□ 0.1
TNFRSF1A-205ENST00000534885 MYOZ3Q8TDC0 251 aa15.65■□□□□ 0.1
TNFRSF1A-205ENST00000534885 RABAC1Q9UI14 185 aa15.65■□□□□ 0.1
TNFRSF1A-205ENST00000534885 CLPSL1A2RUU4 121 aa15.64■□□□□ 0.09
TNFRSF1A-205ENST00000534885 S100A6P06703 90 aa15.64■□□□□ 0.09
TNFRSF1A-205ENST00000534885 SOHLH1Q5JUK2 328 aa15.64■□□□□ 0.09
TNFRSF1A-205ENST00000534885 RNF152Q8N8N0 203 aa15.64■□□□□ 0.09
TNFRSF1A-205ENST00000534885 FAM90A2PQ658T7 463 aa15.64■□□□□ 0.09
TNFRSF1A-205ENST00000534885 SMCO4Q9NRQ5 59 aa15.64■□□□□ 0.09
TNFRSF1A-205ENST00000534885 RPL15P61313 204 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-205ENST00000534885 BIN3Q9NQY0 253 aa15.63■□□□□ 0.09
TNFRSF1A-205ENST00000534885 PEF1Q9UBV8 284 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-205ENST00000534885 H3BTX0 84 aa15.63■□□□□ 0.09
TNFRSF1A-205ENST00000534885 UNQ9165/PRO28630Q6UXU0 137 aa15.63■□□□□ 0.09
TNFRSF1A-205ENST00000534885 BLNKQ8WV28 456 aa15.63■□□□□ 0.09
TNFRSF1A-205ENST00000534885 C20orf24Q9BUV8 137 aa15.63■□□□□ 0.09
TNFRSF1A-205ENST00000534885 SETD2Q9BYW2 2564 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-205ENST00000534885 COLCA2A8K830 154 aa15.62■□□□□ 0.09
TNFRSF1A-205ENST00000534885 GGTLC3B5MD39 225 aa15.62■□□□□ 0.09
TNFRSF1A-205ENST00000534885 ZNF207O43670 478 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1A-205ENST00000534885 TMEM14CQ9P0S9 112 aa15.62■□□□□ 0.09
TNFRSF1A-205ENST00000534885 ARL2-SNX15V9GYD0 113 aa15.62■□□□□ 0.09
TNFRSF1A-205ENST00000534885 H3BQ15 152 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 NBEAP1P0C6P0 100 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 NPPCP23582 126 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 TCTEX1D4Q5JR98 221 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 FAM209BQ5JX69 171 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 S100A7AQ86SG5 101 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 BPIFA4PQ86YQ2 179 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 TMEM250H0YL14 139 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 MRPS12O15235 138 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 GGCTO75223 188 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 UBE2E2Q96LR5 201 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 JMJD8Q96S16 334 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 ZNF586Q9NXT0 402 aa15.61■□□□□ 0.09
TNFRSF1A-205ENST00000534885 A0A1W2PRE2 83 aa15.6■□□□□ 0.09
TNFRSF1A-205ENST00000534885 NDUFA4O00483 81 aa15.6■□□□□ 0.09
TNFRSF1A-205ENST00000534885 PDE6DO43924 150 aa15.6■□□□□ 0.09
TNFRSF1A-205ENST00000534885 C15orf54Q8N8G6 183 aa15.6■□□□□ 0.09
TNFRSF1A-205ENST00000534885 TXNDC17Q9BRA2 123 aa15.6■□□□□ 0.09
TNFRSF1A-205ENST00000534885 IGHV3OR16-13A0A075B7E8 117 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 IGHV3-74A0A0B4J1X5 117 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 SCO2A0A1W2PP80 73 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 APOHP02749 345 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 FOLR2P14207 255 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 SUMO1P63165 101 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 HIST2H2BDQ6DRA6 164 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 LINC01006Q8NI28 216 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 RPUSD4Q96CM3 377 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 IGHV3-49A0A0A0MS15 119 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 IGHV3-66A0A0C4DH42 116 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 CRLF1O75462 422 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 LGALS1P09382 135 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 IGLC2P0DOY2 106 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 RPL35P42766 123 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 AKR1D1P51857 326 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 RANP62826 216 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 SRSF2Q01130 221 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 C18orf65Q6ZTR6 163 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 C17orf77Q96MU5 243 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 METTL26Q96S19 204 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 C16orf95Q9H693 158 aa15.59■□□□□ 0.09
TNFRSF1A-205ENST00000534885 BUB3O43684 328 aa15.58■□□□□ 0.09
TNFRSF1A-205ENST00000534885 HIST1H1EP10412 219 aaKnown RBP15.58■□□□□ 0.09
TNFRSF1A-205ENST00000534885 WIPF2Q8TF74 440 aaPredicted RBP15.58■□□□□ 0.09
TNFRSF1A-205ENST00000534885 DERL1Q9BUN8 251 aa15.58■□□□□ 0.09
TNFRSF1A-205ENST00000534885 PARLQ9H300 379 aa15.58■□□□□ 0.09
TNFRSF1A-205ENST00000534885 NDUFS6O75380 124 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1A-205ENST00000534885 CRYBB3P26998 211 aa15.58■□□□□ 0.08
TNFRSF1A-205ENST00000534885 ZNF674Q2M3X9 581 aa15.58■□□□□ 0.08
TNFRSF1A-205ENST00000534885 OR8I2Q8N0Y5 310 aa15.58■□□□□ 0.08
TNFRSF1A-205ENST00000534885 OR4F17Q8NGA8 305 aa15.58■□□□□ 0.08
TNFRSF1A-205ENST00000534885 RPS10P5Q9NQ39 176 aa15.58■□□□□ 0.08
TNFRSF1A-205ENST00000534885 ZNF320A2RRD8 509 aa15.57■□□□□ 0.08
TNFRSF1A-205ENST00000534885 F6UZH7 168 aa15.57■□□□□ 0.08
TNFRSF1A-205ENST00000534885 NDUFB4O95168 129 aa15.57■□□□□ 0.08
TNFRSF1A-205ENST00000534885 TMEM190Q8WZ59 177 aa15.57■□□□□ 0.08
TNFRSF1A-205ENST00000534885 ELOVL1Q9BW60 279 aa15.57■□□□□ 0.08
TNFRSF1A-205ENST00000534885 SMIM7Q9BQ49 75 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 TCF21O43680 179 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 RPL7P18124 248 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 MYCNOSP40205 109 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 AKR1C3P42330 323 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 AWAT1Q58HT5 328 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 KHDC1LQ5JSQ8 128 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 ZFP82Q8N141 532 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 C2CD4CQ8TF44 421 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 U3KQE9 123 aa15.56■□□□□ 0.08
TNFRSF1A-205ENST00000534885 TRBV19A0A075B6N1 114 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 IGHV4OR15-8A0A075B7B6 117 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 A0A087WW49 117 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 C7orf77A4D0Y5 90 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 ZNF727A8MUV8 499 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 RAB5BP61020 215 aa15.55■□□□□ 0.08
TNFRSF1A-205ENST00000534885 NIPSNAP3BQ9BS92 247 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms