RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 PFDN2Q9UHV9 154 aa10.33□□□□□ -0.76
CD44-224ENST00000526669 SNRPCP09234 159 aaKnown RBP10.32□□□□□ -0.76
CD44-224ENST00000526669 SPP1P10451 314 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 M6PRP20645 277 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 C4BPBP20851 252 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 EIF5AP63241 154 aaKnown RBP10.32□□□□□ -0.76
CD44-224ENST00000526669 AKR1C8PQ5T2L2 129 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 FAM90A2PQ658T7 463 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 BAP18Q8IXM2 172 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 OR10G4Q8NGN3 311 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 OR10G9Q8NGN4 311 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 OR10G7Q8NGN6 311 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 STOML3Q8TAV4 291 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 TMED6Q8WW62 240 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 SEPSECSQ9HD40 501 aaKnown RBP10.32□□□□□ -0.76
CD44-224ENST00000526669 FUT9Q9Y231 359 aa10.32□□□□□ -0.76
CD44-224ENST00000526669 HMGB3O15347 200 aaKnown RBP10.31□□□□□ -0.76
CD44-224ENST00000526669 S100A7P31151 101 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 KRTAP10-11P60412 298 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 RHOBP62745 196 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 SERF2P84101 59 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 TMEM41BQ5BJD5 291 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 S100A7AQ86SG5 101 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 PRR25Q96S07 402 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 RPRMQ9NS64 109 aa10.31□□□□□ -0.76
CD44-224ENST00000526669 A0A1W2PPV4 95 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 ZNF785A8K8V0 405 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 H3BTX0 84 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 PYYP10082 97 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 GALR1P47211 349 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 CDC34P49427 236 aaPredicted RBP10.3□□□□□ -0.76
CD44-224ENST00000526669 C1orf194Q5T5A4 169 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 SSX7Q7RTT5 188 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 OR2K2Q8NGT1 345 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 SLC25A2Q9BXI2 301 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 MRPL32Q9BYC8 188 aaKnown RBP10.3□□□□□ -0.76
CD44-224ENST00000526669 MS4A6AQ9H2W1 248 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 SMAD5-AS1Q9Y6J3 95 aa10.3□□□□□ -0.76
CD44-224ENST00000526669 TRAV25A0A0B4J276 109 aa10.29□□□□□ -0.76
CD44-224ENST00000526669 HELTA6NFD8 242 aa10.29□□□□□ -0.76
CD44-224ENST00000526669 DNASE2O00115 360 aaPredicted RBP10.29□□□□□ -0.76
CD44-224ENST00000526669 TSPAN4O14817 238 aa10.29□□□□□ -0.76
CD44-224ENST00000526669 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
CD44-224ENST00000526669 WIPF1O43516 503 aa10.29□□□□□ -0.76
CD44-224ENST00000526669 MBP02144 154 aa10.29□□□□□ -0.76
CD44-224ENST00000526669 PRB2P02812 416 aaPredicted RBP10.29□□□□□ -0.76
CD44-224ENST00000526669 SEC11BP0C7V7 166 aa10.29□□□□□ -0.76
CD44-224ENST00000526669 GP9P14770 177 aa10.29□□□□□ -0.76
CD44-224ENST00000526669 ATF4P18848 351 aaPredicted RBP10.29□□□□□ -0.76
CD44-224ENST00000526669 RPP25LQ8N5L8 163 aaKnown RBP10.29□□□□□ -0.76
CD44-224ENST00000526669 FAM167A-AS1Q96KT0 104 aa10.29□□□□□ -0.76
CD44-224ENST00000526669 OR7C2O60412 319 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 RPL7P18124 248 aaKnown RBP10.28□□□□□ -0.76
CD44-224ENST00000526669 FHITP49789 147 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 ZNF726P1Q15940 193 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 BEAN1Q3B7T3 259 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 FAM74A1Q5RGS3 127 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 BPIFA4PQ86YQ2 179 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 FAM24BQ8N5W8 94 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 RAB24Q969Q5 203 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 C17orf77Q96MU5 243 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 GPR82Q96P67 336 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 ACTR3CQ9C0K3 210 aaPredicted RBP10.28□□□□□ -0.76
CD44-224ENST00000526669 UBQLN2Q9UHD9 624 aa10.28□□□□□ -0.76
CD44-224ENST00000526669 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
CD44-224ENST00000526669 OR10J4P0C629 311 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 PAFAH1B2P68402 229 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 EGFEM1PQ0D2K5 195 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 KHDC3LQ587J8 217 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 ALKAL2Q6UX46 152 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 FAM213BQ8TBF2 198 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 ZNF503Q96F45 646 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 SPAG8Q99932 426 aaPredicted RBP10.27□□□□□ -0.77
CD44-224ENST00000526669 PAXXQ9BUH6 204 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 NRN1Q9NPD7 142 aa10.27□□□□□ -0.77
CD44-224ENST00000526669 CTXND1A0A1B0GTU2 59 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 H3BQ15 152 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 K7EQG2 157 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 CD5P06127 495 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 CD7P09564 240 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 ARL14EPLP0DKL9 152 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 PRB4P10163 310 aaPredicted RBP10.26□□□□□ -0.77
CD44-224ENST00000526669 FGF8P55075 233 aaPredicted RBP10.26□□□□□ -0.77
CD44-224ENST00000526669 TAS2R45P59539 299 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 CD81P60033 236 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 IGFL4Q6B9Z1 124 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 LCN15Q6UWW0 184 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 BLNKQ8WV28 456 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 WFDC10AQ9H1F0 79 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 OR51M1Q9H341 326 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 ZNF586Q9NXT0 402 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 RNF24Q9Y225 148 aa10.26□□□□□ -0.77
CD44-224ENST00000526669 A0A1B0GV50 99 aa10.25□□□□□ -0.77
CD44-224ENST00000526669 OR4C46A6NHA9 309 aa10.25□□□□□ -0.77
CD44-224ENST00000526669 SLC17A3O00476 420 aa10.25□□□□□ -0.77
CD44-224ENST00000526669 ZNF688P0C7X2 276 aa10.25□□□□□ -0.77
CD44-224ENST00000526669 HLA-DMBP28068 263 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms