RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 NUPR2A6NF83 97 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 ZNF705EA8MWA4 302 aaPredicted RBP12.33□□□□□ -0.44
CCS-203ENST00000526058 F6UB75 175 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 JTBO76095 146 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 CST7O76096 145 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 RAP2BP61225 183 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 RAB32Q13637 225 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 CEMP1Q6PRD7 247 aaPredicted RBP12.33□□□□□ -0.44
CCS-203ENST00000526058 PATE2Q6UY27 113 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 FOXI2Q6ZQN5 318 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 C11orf45Q8TAV5 145 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 ARL6Q9H0F7 186 aa12.33□□□□□ -0.44
CCS-203ENST00000526058 AGPAT2O15120 278 aa12.32□□□□□ -0.44
CCS-203ENST00000526058 RBMY1A1P0DJD3 496 aaKnown RBP12.32□□□□□ -0.44
CCS-203ENST00000526058 RBMY1CP0DJD4 496 aa12.32□□□□□ -0.44
CCS-203ENST00000526058 S100A7P31151 101 aa12.32□□□□□ -0.44
CCS-203ENST00000526058 MEOX2P50222 304 aa12.32□□□□□ -0.44
CCS-203ENST00000526058 FXYD7P58549 80 aa12.32□□□□□ -0.44
CCS-203ENST00000526058 NUTF2P61970 127 aaKnown RBP12.32□□□□□ -0.44
CCS-203ENST00000526058 RBMY1FQ15415 496 aaKnown RBP12.32□□□□□ -0.44
CCS-203ENST00000526058 IGFL4Q6B9Z1 124 aa12.32□□□□□ -0.44
CCS-203ENST00000526058 PHLDA1Q8WV24 401 aaPredicted RBP12.32□□□□□ -0.44
CCS-203ENST00000526058 GPR82Q96P67 336 aa12.32□□□□□ -0.44
CCS-203ENST00000526058 MGST2Q99735 147 aa12.32□□□□□ -0.44
CCS-203ENST00000526058 GPN1Q9HCN4 374 aaPredicted RBP12.32□□□□□ -0.44
CCS-203ENST00000526058 TRAV8-2A0A0B4J237 113 aa12.31□□□□□ -0.44
CCS-203ENST00000526058 GOSR2O14653 212 aa12.31□□□□□ -0.44
CCS-203ENST00000526058 SIX6O95475 246 aa12.31□□□□□ -0.44
CCS-203ENST00000526058 PVALBP20472 110 aaPredicted RBP12.31□□□□□ -0.44
CCS-203ENST00000526058 FGL1Q08830 312 aa12.31□□□□□ -0.44
CCS-203ENST00000526058 OR4B1Q8NGF8 309 aa12.31□□□□□ -0.44
CCS-203ENST00000526058 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
CCS-203ENST00000526058 ARV1Q9H2C2 271 aa12.31□□□□□ -0.44
CCS-203ENST00000526058 BATF3Q9NR55 127 aa12.31□□□□□ -0.44
CCS-203ENST00000526058 LYRM2Q9NU23 88 aaPredicted RBP12.31□□□□□ -0.44
CCS-203ENST00000526058 IGSF23A1L1A6 192 aa12.3□□□□□ -0.44
CCS-203ENST00000526058 INMT-MINDY4F8WBC2 141 aa12.3□□□□□ -0.44
CCS-203ENST00000526058 MIFP14174 115 aa12.3□□□□□ -0.44
CCS-203ENST00000526058 FAM78BQ5VT40 261 aa12.3□□□□□ -0.44
CCS-203ENST00000526058 SAMD13Q5VXD3 122 aa12.3□□□□□ -0.44
CCS-203ENST00000526058 ZNF546Q86UE3 836 aa12.3□□□□□ -0.44
CCS-203ENST00000526058 ZNF709Q8N972 641 aa12.3□□□□□ -0.44
CCS-203ENST00000526058 RPRMQ9NS64 109 aa12.3□□□□□ -0.44
CCS-203ENST00000526058 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
CCS-203ENST00000526058 A0A0J9YX75 114 aa12.29□□□□□ -0.44
CCS-203ENST00000526058 RPL7P18124 248 aaKnown RBP12.29□□□□□ -0.44
CCS-203ENST00000526058 SULT1A1P50225 295 aa12.29□□□□□ -0.44
CCS-203ENST00000526058 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
CCS-203ENST00000526058 RNF182Q8N6D2 247 aa12.29□□□□□ -0.44
CCS-203ENST00000526058 TMEM252Q8N6L7 170 aa12.29□□□□□ -0.44
CCS-203ENST00000526058 SLC35B3Q9H1N7 401 aa12.29□□□□□ -0.44
CCS-203ENST00000526058 KLK5Q9Y337 293 aaPredicted RBP12.29□□□□□ -0.44
CCS-203ENST00000526058 CAMLGP49069 296 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 PSG9Q00887 426 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 PXDC1Q5TGL8 231 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 SPATA31B1PQ5VZV4 182 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 TMEM37Q8WXS4 190 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 CLUHP3Q96NS8 147 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 MFFQ9GZY8 342 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 UQCC1Q9NVA1 299 aa12.28□□□□□ -0.44
CCS-203ENST00000526058 MRPS12O15235 138 aaKnown RBP12.27□□□□□ -0.45
CCS-203ENST00000526058 PRAF2O60831 178 aa12.27□□□□□ -0.45
CCS-203ENST00000526058 VWC2Q2TAL6 325 aa12.27□□□□□ -0.45
CCS-203ENST00000526058 MIC13Q5XKP0 118 aa12.27□□□□□ -0.45
CCS-203ENST00000526058 LINC00476Q8WZB0 136 aa12.27□□□□□ -0.45
CCS-203ENST00000526058 MARVELD1Q9BSK0 173 aa12.27□□□□□ -0.45
CCS-203ENST00000526058 A0A087X0K7 114 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 UBE2L5PA0A1B0GUS4 154 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 COX7A2P2O60397 106 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 SNRPCP09234 159 aaKnown RBP12.26□□□□□ -0.45
CCS-203ENST00000526058 ZNF705DP0CH99 300 aaPredicted RBP12.26□□□□□ -0.45
CCS-203ENST00000526058 ZNF705BP0CI00 300 aaPredicted RBP12.26□□□□□ -0.45
CCS-203ENST00000526058 HLA-DMBP28068 263 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 S100A11P31949 105 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 DEFA1P59665 94 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 DEFA3P59666 94 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 MORN5Q5VZ52 161 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
CCS-203ENST00000526058 S100A7AQ86SG5 101 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 STX12Q86Y82 276 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 WDR83OSQ9Y284 106 aa12.26□□□□□ -0.45
CCS-203ENST00000526058 IGHV3OR16-12A0A075B7B8 117 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 PRB4P10163 310 aaPredicted RBP12.25□□□□□ -0.45
CCS-203ENST00000526058 PRR20EP86478 221 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 PRR20CP86479 221 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 PRR20DP86480 221 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 PRR20BP86481 221 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 PRR20AP86496 221 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 RAB31Q13636 194 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 LRRC37A5PQ49AS3 106 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 NMES1Q9C002 83 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 HRH4Q9H3N8 390 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 OR5AC2Q9NZP5 309 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 CELA1Q9UNI1 258 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 KMT2AQ03164 3969 aa12.25□□□□□ -0.45
CCS-203ENST00000526058 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
CCS-203ENST00000526058 A8MTW9 85 aa12.24□□□□□ -0.45
CCS-203ENST00000526058 ZNF705FA8MVS1 300 aaPredicted RBP12.24□□□□□ -0.45
CCS-203ENST00000526058 H0YIZ8 118 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms