RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TSTD3H0UI37 97 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 H3BUX3 64 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 M0QXV9 152 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 SULT1C2O00338 296 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 SDCBPO00560 298 aaPredicted RBP2.42□□□□□ -2.02
CD44-219ENST00000525685 PPP1R2P9O14990 202 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 RGS5O15539 181 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 CHST1O43916 411 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 SOX15O60248 233 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 EIF3GO75821 320 aaKnown RBP eCLIP2.42□□□□□ -2.02
CD44-219ENST00000525685 NAPSAO96009 420 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 IGKV2D-28P01615 120 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 IGHV3-7P01780 117 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 HBZP02008 142 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 GAPDHP04406 335 aaKnown RBP2.42□□□□□ -2.02
CD44-219ENST00000525685 HIST1H1DP16402 221 aaKnown RBP2.42□□□□□ -2.02
CD44-219ENST00000525685 ZNF25P17030 456 aaPredicted RBP2.42□□□□□ -2.02
CD44-219ENST00000525685 NFYBP25208 207 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 HTR1DP28221 377 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 GNRHRP30968 328 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 RPL19P84098 196 aaKnown RBP2.42□□□□□ -2.02
CD44-219ENST00000525685 DIAPH2-AS1Q14236 149 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 LY6EQ16553 131 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 GUCA2BQ16661 112 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 LRRC75BQ2VPJ9 315 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 GCSAMLQ5JQS6 135 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 TPTE2P1Q5T6R2 138 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 MINOS1Q5TGZ0 78 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 ZNF880Q6PDB4 577 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 ZFP2Q6ZN57 461 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 TCF24Q7RTU0 167 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 TMEM144Q7Z5S9 345 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 LINC00311Q8N616 119 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 TMEM86BQ8N661 226 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 ZNF439Q8NDP4 499 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 OR10R2Q8NGX6 335 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 LEAP2Q969E1 77 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 ARL11Q969Q4 196 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 SLC25A46Q96AG3 418 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 RARRES2Q99969 163 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 CMSS1Q9BQ75 279 aaKnown RBP2.42□□□□□ -2.02
CD44-219ENST00000525685 FAAP24Q9BTP7 215 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 ATG5Q9H1Y0 275 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 LINC00574Q9H8X3 128 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 TAF9BQ9HBM6 251 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 NECAP2Q9NVZ3 263 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 PLEKHJ1Q9NW61 149 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 ABRACLQ9P1F3 81 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 COPZ2Q9P299 210 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 XCL2Q9UBD3 114 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 JPT1Q9UK76 154 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 PITPNC1Q9UKF7 332 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 VPREB3Q9UKI3 123 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 RAB22AQ9UL26 194 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 TRAPPC2LQ9UL33 140 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 MINOS1-NBL1R4GNA1 71 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 DNHD1Q96M86 4753 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 NACAE9PAV3 2078 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 DOCK11Q5JSL3 2073 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 ACANP16112 2415 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 IGKV1-6A0A0C4DH72 117 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 TMEM235A6NFC5 223 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 CENPXA8MT69 81 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 OR11H12B2RN74 326 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 KRBOX1C9JBD0 128 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 LY6LH3BQJ8 138 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 BUB1B-PAK6H3BSN5 160 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 SIVA1O15304 175 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 FABP7O15540 132 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 GGCTO75223 188 aaKnown RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 SCO1O75880 301 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 TSPAN13O95857 204 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 PTTG1O95997 202 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 EIF4EP06730 217 aaKnown RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 SCTP09683 121 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 TRAPPC2P0DI81 140 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 TRAPPC2BP0DI82 140 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 PET100P0DJ07 73 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 PTHLHP12272 177 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 GZMHP20718 246 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 IL3RAP26951 378 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 DDTP30046 118 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 S100A11P31949 105 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 PPP1CCP36873 323 aaKnown RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 DYNLT3P51808 116 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 RPS20P60866 119 aaKnown RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 PKIAP61925 76 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 ZNF816Q0VGE8 651 aaPredicted RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 TNXAQ16473 311 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 POU2AF1Q16633 256 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 ATP6V1FQ16864 119 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 MORN2Q502X0 79 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 UBE2NLQ5JXB2 153 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 C19orf35Q6ZS72 473 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 SLC25A48Q6ZT89 311 aaKnown RBP2.41□□□□□ -2.02
CD44-219ENST00000525685 H2BFWTQ7Z2G1 175 aa2.41□□□□□ -2.02
CD44-219ENST00000525685 EIF4E3Q8N5X7 224 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms