RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 RPL35AP18077 110 aaKnown RBP3.83□□□□□ -1.8
SVIP-202ENST00000525670 INSL3P51460 131 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 CAV2P51636 162 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 RAB11AP62491 216 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 SLC38A11Q08AI6 406 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 GAMTQ14353 236 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 USF2Q15853 346 aaPredicted RBP3.83□□□□□ -1.8
SVIP-202ENST00000525670 DEFB114Q30KQ6 69 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 BSXQ3C1V8 233 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 AARDQ4LEZ3 155 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 ZNF600Q6ZNG1 722 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 TCF24Q7RTU0 167 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 GPHB5Q86YW7 130 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 APRG1Q8IVJ8 170 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 FAM24BQ8N5W8 94 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 LRTM2Q8N967 370 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 TMEM116Q8NCL8 245 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 STXBP6Q8NFX7 210 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 OR51G1Q8NGK1 321 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 PPP1R14BQ96C90 147 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 NEURL2Q9BR09 285 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 RHPN1-AS1Q9BWJ2 59 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 TUBA4BQ9H853 241 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 SRD5A3Q9H8P0 318 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 PALMDQ9NP74 551 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 STRAPQ9Y3F4 350 aaKnown RBP3.83□□□□□ -1.8
SVIP-202ENST00000525670 ALG5Q9Y673 324 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 SMAD5-AS1Q9Y6J3 95 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 STAB2Q8WWQ8 2551 aa3.83□□□□□ -1.8
SVIP-202ENST00000525670 IGKV1D-37A0A075B6S9 117 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 IGKV1OR2-108A0A075B7D4 117 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 TRAV14DV4A0A0A6YYC5 116 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 UBE2L5PA0A1B0GUS4 154 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 IGSF23A1L1A6 192 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 OR11H12B2RN74 326 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 LGALS9O00182 355 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 CHEK1O14757 476 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 DFFBO76075 338 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 P2RY1P47900 373 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 PAX9P55771 341 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 DEFB1P60022 68 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 LEMD1Q68G75 181 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 SBSPONQ8IVN8 264 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 OR1S2Q8NGQ3 325 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 OR4X1Q8NH49 305 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 RNASEH2CQ8TDP1 164 aaKnown RBP3.82□□□□□ -1.8
SVIP-202ENST00000525670 METTL26Q96S19 204 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 GINS3Q9BRX5 216 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 SMIM3Q9BZL3 60 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 SLC25A22Q9H936 323 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 GPN1Q9HCN4 374 aaPredicted RBP3.82□□□□□ -1.8
SVIP-202ENST00000525670 OR5AC2Q9NZP5 309 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 U3KQ87 197 aa3.82□□□□□ -1.8
SVIP-202ENST00000525670 C7orf66A4D0T2 115 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 FAM90A26D6RGX4 464 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 PRSS46E5RG02 174 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 INS-IGF2F8WCM5 200 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 H3BTX0 84 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 DNASE2O00115 360 aaPredicted RBP3.81□□□□□ -1.8
SVIP-202ENST00000525670 SCGB2A1O75556 95 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 EIF3GO75821 320 aaKnown RBP eCLIP3.81□□□□□ -1.8
SVIP-202ENST00000525670 ZNF688P0C7X2 276 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 RD3LP0DJH9 198 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 SLC25A4P12235 298 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 SLC25A6P12236 298 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 ORM2P19652 201 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 BAXQ07812 192 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 CLINT1Q14677 625 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 KLK9Q2XQG4 91 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 PVRIGQ6DKI7 326 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 ETFRF1Q6IPR1 90 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 TMEM182Q6ZP80 229 aaPredicted RBP3.81□□□□□ -1.8
SVIP-202ENST00000525670 LINC00299Q6ZSB3 139 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 OR1B1Q8NGR6 318 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 Q8WTZ3 238 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 RNF125Q96EQ8 232 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 C2orf50Q96LR7 162 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 CIB3Q96Q77 187 aaPredicted RBP3.81□□□□□ -1.8
SVIP-202ENST00000525670 TXN2Q99757 166 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 SCRT1Q9BWW7 348 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 MS4A6AQ9H2W1 248 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 MRPL27Q9P0M9 148 aaKnown RBP3.81□□□□□ -1.8
SVIP-202ENST00000525670 SMPXQ9UHP9 88 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 KLK9Q9UKQ9 250 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 LSM4Q9Y4Z0 139 aaKnown RBP3.81□□□□□ -1.8
SVIP-202ENST00000525670 AGRNO00468 2067 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 STARD9Q9P2P6 4700 aa3.81□□□□□ -1.8
SVIP-202ENST00000525670 RBMY1BA6NDE4 496 aaKnown RBP3.8□□□□□ -1.8
SVIP-202ENST00000525670 RBMY1EA6NEQ0 496 aaKnown RBP3.8□□□□□ -1.8
SVIP-202ENST00000525670 KNCNA6PVL3 124 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 SMLR1H3BR10 107 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 IL5P05113 134 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 OR5G3P0C626 314 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 RBMY1DP0C7P1 496 aaKnown RBP3.8□□□□□ -1.8
SVIP-202ENST00000525670 LINC00869P0C866 280 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 CXCL3P19876 107 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 FGF7P21781 194 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 NPPCP23582 126 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms