RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 SSBP1Q04837 148 aaKnown RBP10.2□□□□□ -0.78
CSTF3-204ENST00000524556 GGNBP1Q5YKI7 109 aa10.2□□□□□ -0.78
CSTF3-204ENST00000524556 TMEM256Q8N2U0 113 aa10.2□□□□□ -0.78
CSTF3-204ENST00000524556 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
CSTF3-204ENST00000524556 OR1B1Q8NGR6 318 aa10.2□□□□□ -0.78
CSTF3-204ENST00000524556 C16orf74Q96GX8 76 aa10.2□□□□□ -0.78
CSTF3-204ENST00000524556 UHRF2Q96PU4 802 aa10.2□□□□□ -0.78
CSTF3-204ENST00000524556 KCNIP3Q9Y2W7 256 aa10.2□□□□□ -0.78
CSTF3-204ENST00000524556 TIMM8BQ9Y5J9 83 aaPredicted RBP10.2□□□□□ -0.78
CSTF3-204ENST00000524556 A0A0B4J2A0 478 aa10.19□□□□□ -0.78
CSTF3-204ENST00000524556 BOLA2-SMG1P6H3BVE0 249 aa10.19□□□□□ -0.78
CSTF3-204ENST00000524556 ZNF182P17025 639 aaPredicted RBP10.19□□□□□ -0.78
CSTF3-204ENST00000524556 LYZL2Q7Z4W2 148 aa10.19□□□□□ -0.78
CSTF3-204ENST00000524556 AP3S1Q92572 193 aa10.19□□□□□ -0.78
CSTF3-204ENST00000524556 GNPNAT1Q96EK6 184 aaPredicted RBP10.19□□□□□ -0.78
CSTF3-204ENST00000524556 ZNF503Q96F45 646 aa10.19□□□□□ -0.78
CSTF3-204ENST00000524556 GPR82Q96P67 336 aa10.19□□□□□ -0.78
CSTF3-204ENST00000524556 UPK3BQ9BT76 320 aa10.19□□□□□ -0.78
CSTF3-204ENST00000524556 SLC25A39Q9BZJ4 359 aaPredicted RBP10.19□□□□□ -0.78
CSTF3-204ENST00000524556 SHPKQ9UHJ6 478 aa10.19□□□□□ -0.78
CSTF3-204ENST00000524556 TRAV26-1A0A087WT03 109 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 HTN1P15515 57 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 ORM2P19652 201 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 RAB11AP62491 216 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 DLK1P80370 383 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 OR5I1Q13606 314 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 ESRGQ1W209 222 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 TMEM144Q7Z5S9 345 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 ZNF738Q8NE65 137 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 RXFP4Q8TDU9 374 aa10.18□□□□□ -0.78
CSTF3-204ENST00000524556 NOP10Q9NPE3 64 aaKnown RBP10.18□□□□□ -0.78
CSTF3-204ENST00000524556 AKAIN1P0CW23 69 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 AKR1C4P17516 323 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 S100A7P31151 101 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 RHOBP62745 196 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 MRPS10P82664 201 aaKnown RBP10.17□□□□□ -0.78
CSTF3-204ENST00000524556 FGL1Q08830 312 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 TMEM182Q6ZP80 229 aaPredicted RBP10.17□□□□□ -0.78
CSTF3-204ENST00000524556 ZNF493Q6ZR52 646 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 BPIFCQ8NFQ6 507 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 OR10J6PQ8NGY7 276 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 OR1S1Q8NH92 325 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 PRRT1Q99946 306 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 TMEM147Q9BVK8 224 aa10.17□□□□□ -0.78
CSTF3-204ENST00000524556 M6PRP20645 277 aa10.16□□□□□ -0.78
CSTF3-204ENST00000524556 GATA2P23769 480 aaPredicted RBP10.16□□□□□ -0.78
CSTF3-204ENST00000524556 HIST1H1AQ02539 215 aaPredicted RBP10.16□□□□□ -0.78
CSTF3-204ENST00000524556 LYPD1Q8N2G4 141 aa10.16□□□□□ -0.78
CSTF3-204ENST00000524556 OR8A1Q8NGG7 326 aa10.16□□□□□ -0.78
CSTF3-204ENST00000524556 OR51S1Q8NGJ8 323 aa10.16□□□□□ -0.78
CSTF3-204ENST00000524556 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
CSTF3-204ENST00000524556 PPP1R14DQ9NXH3 145 aa10.16□□□□□ -0.78
CSTF3-204ENST00000524556 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
CSTF3-204ENST00000524556 ZNF586Q9NXT0 402 aa10.16□□□□□ -0.78
CSTF3-204ENST00000524556 PAIP2BQ9ULR5 123 aaKnown RBP10.16□□□□□ -0.78
CSTF3-204ENST00000524556 MRPS16Q9Y3D3 137 aaKnown RBP10.16□□□□□ -0.78
CSTF3-204ENST00000524556 A0A0J9YY99 117 aa10.15□□□□□ -0.78
CSTF3-204ENST00000524556 ZNF701M0R085 212 aaPredicted RBP10.15□□□□□ -0.78
CSTF3-204ENST00000524556 PITX3O75364 302 aa10.15□□□□□ -0.78
CSTF3-204ENST00000524556 IAPPP10997 89 aa10.15□□□□□ -0.78
CSTF3-204ENST00000524556 LINC00612Q8N6U2 182 aa10.15□□□□□ -0.78
CSTF3-204ENST00000524556 TMEM263Q8WUH6 116 aaKnown RBP10.15□□□□□ -0.78
CSTF3-204ENST00000524556 MIXL1Q9H2W2 232 aa10.15□□□□□ -0.78
CSTF3-204ENST00000524556 PRSS46E5RG02 174 aa10.14□□□□□ -0.79
CSTF3-204ENST00000524556 H3BNG1 76 aa10.14□□□□□ -0.79
CSTF3-204ENST00000524556 ADAP1O75689 374 aa10.14□□□□□ -0.79
CSTF3-204ENST00000524556 HOXA5P20719 270 aa10.14□□□□□ -0.79
CSTF3-204ENST00000524556 XGP55808 180 aa10.14□□□□□ -0.79
CSTF3-204ENST00000524556 SRPXP78539 464 aa10.14□□□□□ -0.79
CSTF3-204ENST00000524556 Q6ZRN7 208 aaPredicted RBP10.14□□□□□ -0.79
CSTF3-204ENST00000524556 CLVS1Q8IUQ0 354 aaPredicted RBP10.14□□□□□ -0.79
CSTF3-204ENST00000524556 SMIM4Q8WVI0 70 aa10.14□□□□□ -0.79
CSTF3-204ENST00000524556 SCGB3A2Q96PL1 93 aa10.14□□□□□ -0.79
CSTF3-204ENST00000524556 H3BRN7 92 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 H7BYZ3 331 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 ANXA3P12429 323 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 CXCL3P19876 107 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 CDKN1BP46527 198 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 LINC00315P59091 139 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 PSG3Q16557 428 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 CTF1Q16619 201 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 SHANK2-AS3Q9BTD1 123 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 PTTG2Q9NZH5 202 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 SCP2D1Q9UJQ7 156 aa10.13□□□□□ -0.79
CSTF3-204ENST00000524556 SRRM2Q9UQ35 2752 aaKnown RBP10.13□□□□□ -0.79
CSTF3-204ENST00000524556 MED6O75586 246 aa10.12□□□□□ -0.79
CSTF3-204ENST00000524556 RPL7P18124 248 aaKnown RBP10.12□□□□□ -0.79
CSTF3-204ENST00000524556 RPP30P78346 268 aaKnown RBP10.12□□□□□ -0.79
CSTF3-204ENST00000524556 Q5VSD8 79 aa10.12□□□□□ -0.79
CSTF3-204ENST00000524556 C20orf144Q9BQM9 153 aa10.12□□□□□ -0.79
CSTF3-204ENST00000524556 NAA50Q9GZZ1 169 aaKnown RBP10.12□□□□□ -0.79
CSTF3-204ENST00000524556 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
CSTF3-204ENST00000524556 A0A087X0K7 114 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 PIGBOS1A0A0B4J2F0 54 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 DUXBA0A1W2PPF3 345 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 ANKRD20A5PA0PJZ0 165 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 GAGE12BA1L429 117 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 CTDSPLO15194 276 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 GAGE7O76087 117 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms