RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CHCHD1Q96BP2 118 aaKnown RBP13.21□□□□□ -0.29
PCDHA3-201ENST00000522353 TMEM242Q9NWH2 141 aa13.21□□□□□ -0.29
PCDHA3-201ENST00000522353 VWA8A3KMH1 1905 aa13.21□□□□□ -0.29
PCDHA3-201ENST00000522353 DOCK10Q96BY6 2186 aa13.21□□□□□ -0.3
PCDHA3-201ENST00000522353 TRAV12-3A0A0B4J271 114 aa13.21□□□□□ -0.3
PCDHA3-201ENST00000522353 TCRAP04437 139 aa13.21□□□□□ -0.3
PCDHA3-201ENST00000522353 VSIRQ9H7M9 311 aa13.21□□□□□ -0.3
PCDHA3-201ENST00000522353 SELENOKQ9Y6D0 94 aa13.21□□□□□ -0.3
PCDHA3-201ENST00000522353 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
PCDHA3-201ENST00000522353 LCN12Q6JVE5 192 aa13.2□□□□□ -0.3
PCDHA3-201ENST00000522353 CLDN16Q9Y5I7 305 aa13.2□□□□□ -0.3
PCDHA3-201ENST00000522353 MPDZO75970 2070 aa13.2□□□□□ -0.3
PCDHA3-201ENST00000522353 FAM110DQ8TAY7 271 aaPredicted RBP13.2□□□□□ -0.3
PCDHA3-201ENST00000522353 TSPAN13O95857 204 aa13.2□□□□□ -0.3
PCDHA3-201ENST00000522353 MTURNQ8N3F0 131 aa13.2□□□□□ -0.3
PCDHA3-201ENST00000522353 NCOR1P1Q9H4R4 102 aa13.2□□□□□ -0.3
PCDHA3-201ENST00000522353 PGPEP1LA6NFU8 196 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 AMBPP02760 352 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 UBE2E2Q96LR5 201 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 MCRIP2Q9BUT9 160 aaKnown RBP13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 ARFGEF3Q5TH69 2177 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 PTPRQQ9UMZ3 2332 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 CFHR2P36980 270 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 GFI1BQ5VTD9 330 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 ACACBO00763 2458 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 ZNF876PQ49A33 203 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 MGST2Q99735 147 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 PLNP26678 52 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 SRSF3P84103 164 aaKnown RBP13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 LINC01619G3V211 115 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 CKS1BP61024 79 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 C5orf30Q96GV9 206 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
PCDHA3-201ENST00000522353 SPCS1Q9Y6A9 102 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 FNDC10F2Z333 226 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 MORN3Q6PF18 240 aaPredicted RBP13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 LINC00469Q8N7U9 141 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 SIP14410 1827 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 KIAA2026Q5HYC2 2103 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 TRBV24-1A0A075B6N3 115 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 A0A1B0GW64 132 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 E9PQ18 207 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 SEC11AP67812 179 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 TRAV9-2A0A087WT02 112 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 RNASE2P10153 161 aaKnown RBP13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 LMO1P25800 156 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 DEFB131AP59861 70 aa13.18□□□□□ -0.3
PCDHA3-201ENST00000522353 LINC00587B1AMM8 73 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 ATP6V0E1O15342 81 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 OR5A1Q8NGJ0 315 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 PROK2Q9HC23 129 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 PGPEP1Q9NXJ5 209 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 CHTOPQ9Y3Y2 248 aaKnown RBP13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 IGKV1-16P04430 117 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 AGMATQ9BSE5 352 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 REG4Q9BYZ8 158 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 SMPXQ9UHP9 88 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 FAM215AQ9Y5M1 114 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 QRFPP83859 136 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 C21orf62-AS1Q17RA5 79 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 C1QL4Q86Z23 238 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 C10orf126Q8N4M7 172 aa13.17□□□□□ -0.3
PCDHA3-201ENST00000522353 PSG3Q16557 428 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 LHFPL4Q7Z7J7 247 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 NIT1Q86X76 327 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 COL4A6Q14031 1691 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 EVI2AP22794 236 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 SPATA31B1PQ5VZV4 182 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 SLC25A2Q9BXI2 301 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 IGHV3-53P01767 116 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 TCF15Q12870 199 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 RASL11AQ6T310 242 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 LAMTOR2Q9Y2Q5 125 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 MED13LQ71F56 2210 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 NDUFB8O95169 186 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 FOXL1Q12952 345 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 CYTL1Q9NRR1 136 aa13.16□□□□□ -0.3
PCDHA3-201ENST00000522353 A0A1B0GV90 55 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 FXYD7P58549 80 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 PDE6HQ13956 83 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BKO60814 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BJP06899 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BOP23527 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BBP33778 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BDP58876 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BCP62807 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST2H2BEQ16778 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BHQ93079 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BNQ99877 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 HIST1H2BMQ99879 126 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 LY96Q9Y6Y9 160 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 ANK1P16157 1881 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 LRRK1Q38SD2 2015 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 IGKCP01834 107 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 RIPPLY3P57055 190 aa13.15□□□□□ -0.3
PCDHA3-201ENST00000522353 CA1P00915 261 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms