RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ARV1Q9H2C2 271 aa15.09■□□□□ 0.01
TRIM35-203ENST00000521253 OR5AC2Q9NZP5 309 aa15.09■□□□□ 0.01
TRIM35-203ENST00000521253 WDR83OSQ9Y284 106 aa15.09■□□□□ 0.01
TRIM35-203ENST00000521253 DYNC2H1Q8NCM8 4307 aaKnown RBP15.08■□□□□ 0
TRIM35-203ENST00000521253 UBE2L5PA0A1B0GUS4 154 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 H3BMM0 161 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 PTTG1O95997 202 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 CAMLGP49069 296 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 PXDC1Q5TGL8 231 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 SAMD13Q5VXD3 122 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 IL17DQ8TAD2 202 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 RARRES2Q99969 163 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 TENM2Q9NT68 2774 aa15.08■□□□□ 0
TRIM35-203ENST00000521253 E5RGE8 158 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 HLA-DRB4P13762 266 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 EWSR1Q01844 656 aaKnown RBP eCLIP15.07■□□□□ 0
TRIM35-203ENST00000521253 RAB31Q13636 194 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 GDF5OSQ5U4N7 250 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 S100A7AQ86SG5 101 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 OR11H2Q8NH07 326 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 PPP1R1CQ8WVI7 109 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 C16orf92Q96LL3 132 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 HLA-DRB4X5D2U9 266 aa15.07■□□□□ 0
TRIM35-203ENST00000521253 RYR3Q15413 4870 aa15.06■□□□□ 0
TRIM35-203ENST00000521253 RPL7P18124 248 aaKnown RBP15.06■□□□□ 0
TRIM35-203ENST00000521253 ATP6V1FQ16864 119 aa15.06■□□□□ 0
TRIM35-203ENST00000521253 TMEM41BQ5BJD5 291 aa15.06■□□□□ 0
TRIM35-203ENST00000521253 C20orf173Q96LM9 149 aa15.06■□□□□ 0
TRIM35-203ENST00000521253 SAV1Q9H4B6 383 aaPredicted RBP15.06■□□□□ 0
TRIM35-203ENST00000521253 COX7A2P2O60397 106 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 PRR20EP86478 221 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 PRR20CP86479 221 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 PRR20DP86480 221 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 PRR20BP86481 221 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 PRR20AP86496 221 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 NHLH2Q02577 135 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 BAXQ07812 192 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 MIC13Q5XKP0 118 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 FOXI2Q6ZQN5 318 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 LINC00305Q7Z4B0 112 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 TMEM37Q8WXS4 190 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 SLC25A31Q9H0C2 315 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 ALG5Q9Y673 324 aa15.05■□□□□ -0
TRIM35-203ENST00000521253 ATF4P18848 351 aaPredicted RBP15.04■□□□□ -0
TRIM35-203ENST00000521253 FGF7P21781 194 aa15.04■□□□□ -0
TRIM35-203ENST00000521253 FGL1Q08830 312 aa15.04■□□□□ -0
TRIM35-203ENST00000521253 OR5C1Q8NGR4 320 aa15.04■□□□□ -0
TRIM35-203ENST00000521253 CLEC5AQ9NY25 188 aa15.04■□□□□ -0
TRIM35-203ENST00000521253 ELOA3CA0A087WX78 387 aaPredicted RBP15.03■□□□□ -0
TRIM35-203ENST00000521253 TRAV8-2A0A0B4J237 113 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 F6UB75 175 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 MPC2O95563 127 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 NUTF2P61970 127 aaKnown RBP15.03■□□□□ -0
TRIM35-203ENST00000521253 OPCMLQ14982 345 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 IGFL4Q6B9Z1 124 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 Q6ZRG5 221 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 RNF126Q9BV68 326 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 RPRMQ9NS64 109 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 SACSQ9NZJ4 4579 aa15.03■□□□□ -0
TRIM35-203ENST00000521253 A0A087X0K7 114 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 MRPS12O15235 138 aaKnown RBP15.02■□□□□ -0
TRIM35-203ENST00000521253 IGKV3-20P01619 116 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 RPL29P47914 159 aaKnown RBP15.02■□□□□ -0
TRIM35-203ENST00000521253 MORN5Q5VZ52 161 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 C10orf113Q5VZT2 155 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 CSNK1G2-AS1Q8NCQ2 148 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 CHAC2Q8WUX2 184 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 DNAJC4Q9NNZ3 241 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 SLC39A9Q9NUM3 307 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 RNF24Q9Y225 148 aa15.02■□□□□ -0
TRIM35-203ENST00000521253 B2MP61769 119 aa15.01□□□□□ -0.01
TRIM35-203ENST00000521253 SPATA31B1PQ5VZV4 182 aa15.01□□□□□ -0.01
TRIM35-203ENST00000521253 EBLN2Q6P2I7 272 aa15.01□□□□□ -0.01
TRIM35-203ENST00000521253 RNF182Q8N6D2 247 aa15.01□□□□□ -0.01
TRIM35-203ENST00000521253 A0A0J9YX75 114 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 MPDU1O75352 247 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 PET100P0DJ07 73 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 CXCL3P19876 107 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 CLINT1Q14677 625 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 OR4B1Q8NGF8 309 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 OR1L4Q8NGR5 311 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 THAP6Q8TBB0 222 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 CLUHP3Q96NS8 147 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 C1QTNF4Q9BXJ3 329 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 NPCDR1Q9BY65 106 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 C11orf68Q9H3H3 251 aaKnown RBP15□□□□□ -0.01
TRIM35-203ENST00000521253 XCL2Q9UBD3 114 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 PXMP4Q9Y6I8 212 aa15□□□□□ -0.01
TRIM35-203ENST00000521253 PLECQ15149 4684 aaKnown RBP14.99□□□□□ -0.01
TRIM35-203ENST00000521253 ZNF705EA8MWA4 302 aaPredicted RBP14.99□□□□□ -0.01
TRIM35-203ENST00000521253 DEFB4AO15263 64 aa14.99□□□□□ -0.01
TRIM35-203ENST00000521253 FAM78BQ5VT40 261 aa14.99□□□□□ -0.01
TRIM35-203ENST00000521253 BPIFA4PQ86YQ2 179 aa14.99□□□□□ -0.01
TRIM35-203ENST00000521253 PFDN5Q99471 154 aa14.99□□□□□ -0.01
TRIM35-203ENST00000521253 LYSTQ99698 3801 aa14.99□□□□□ -0.01
TRIM35-203ENST00000521253 X6R8D5 127 aa14.99□□□□□ -0.01
TRIM35-203ENST00000521253 SNRPCP09234 159 aaKnown RBP14.98□□□□□ -0.01
TRIM35-203ENST00000521253 FXYD7P58549 80 aa14.98□□□□□ -0.01
TRIM35-203ENST00000521253 PMS2P11Q13670 270 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms