RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 LINC00869P0C866 280 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 RAP2BP61225 183 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 EBLN2Q6P2I7 272 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 ZNF705AQ6ZN79 300 aaPredicted RBP12.3□□□□□ -0.44
SQLE-205ENST00000521232 C12orf45Q8N5I9 185 aaPredicted RBP12.3□□□□□ -0.44
SQLE-205ENST00000521232 ZNF709Q8N972 641 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 C2CD4CQ8TF44 421 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 NEU1Q99519 415 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 SHANK2-AS3Q9BTD1 123 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 SCRT1Q9BWW7 348 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 DOK5Q9P104 306 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 HIGD1AQ9Y241 93 aa12.3□□□□□ -0.44
SQLE-205ENST00000521232 A0A0J9YX75 114 aa12.29□□□□□ -0.44
SQLE-205ENST00000521232 FAM240BA0A1B0GVZ2 78 aa12.29□□□□□ -0.44
SQLE-205ENST00000521232 F6UB75 175 aa12.29□□□□□ -0.44
SQLE-205ENST00000521232 HLA-DMBP28068 263 aa12.29□□□□□ -0.44
SQLE-205ENST00000521232 TCTAP57738 103 aa12.29□□□□□ -0.44
SQLE-205ENST00000521232 FAM78BQ5VT40 261 aa12.29□□□□□ -0.44
SQLE-205ENST00000521232 LGALS9CQ6DKI2 356 aa12.29□□□□□ -0.44
SQLE-205ENST00000521232 OR4B1Q8NGF8 309 aa12.29□□□□□ -0.44
SQLE-205ENST00000521232 C5orf51A6NDU8 294 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 A6NHS1 94 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 A8MTW9 85 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 ZNF705FA8MVS1 300 aaPredicted RBP12.28□□□□□ -0.44
SQLE-205ENST00000521232 FAM25EA8MYX2 175 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 L7N2F9 121 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 ZNF705DP0CH99 300 aaPredicted RBP12.28□□□□□ -0.44
SQLE-205ENST00000521232 ZNF705BP0CI00 300 aaPredicted RBP12.28□□□□□ -0.44
SQLE-205ENST00000521232 RPL7P18124 248 aaKnown RBP12.28□□□□□ -0.44
SQLE-205ENST00000521232 FXYD7P58549 80 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 VAMP2P63027 116 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 PSG9Q00887 426 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 ASAH1Q13510 395 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 MZT2BQ6NZ67 158 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 PATE2Q6UY27 113 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 S100A7AQ86SG5 101 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 C2orf50Q96LR7 162 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 C11orf1Q9H5F2 150 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 DNAH10Q8IVF4 4471 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 DNAH6Q9C0G6 4158 aa12.28□□□□□ -0.44
SQLE-205ENST00000521232 TRAV8-2A0A0B4J237 113 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 SMIM9A6NGZ8 99 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 OR5G3P0C626 314 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 SLC38A11Q08AI6 406 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 IL15RAQ13261 267 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 PXDC1Q5TGL8 231 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 UHRF2Q96PU4 802 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 ARL6Q9H0F7 186 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 SLC35B3Q9H1N7 401 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 LSM5Q9Y4Y9 91 aaKnown RBP12.27□□□□□ -0.45
SQLE-205ENST00000521232 FRAS1Q86XX4 4008 aa12.27□□□□□ -0.45
SQLE-205ENST00000521232 GOSR2O14653 212 aa12.26□□□□□ -0.45
SQLE-205ENST00000521232 AGPAT2O15120 278 aa12.26□□□□□ -0.45
SQLE-205ENST00000521232 Q6ZTC4 211 aa12.26□□□□□ -0.45
SQLE-205ENST00000521232 ZNF546Q86UE3 836 aa12.26□□□□□ -0.45
SQLE-205ENST00000521232 ARV1Q9H2C2 271 aa12.26□□□□□ -0.45
SQLE-205ENST00000521232 CELA1Q9UNI1 258 aa12.26□□□□□ -0.45
SQLE-205ENST00000521232 RNF24Q9Y225 148 aa12.26□□□□□ -0.45
SQLE-205ENST00000521232 A0A087X0K7 114 aa12.25□□□□□ -0.45
SQLE-205ENST00000521232 TRAV10A0A0B4J240 114 aa12.25□□□□□ -0.45
SQLE-205ENST00000521232 BCAP31P51572 246 aa12.25□□□□□ -0.45
SQLE-205ENST00000521232 FGL1Q08830 312 aa12.25□□□□□ -0.45
SQLE-205ENST00000521232 C12orf74Q32Q52 190 aa12.25□□□□□ -0.45
SQLE-205ENST00000521232 IGFL4Q6B9Z1 124 aa12.25□□□□□ -0.45
SQLE-205ENST00000521232 AMTNQ6UX39 209 aa12.25□□□□□ -0.45
SQLE-205ENST00000521232 APLNQ9ULZ1 77 aa12.25□□□□□ -0.45
SQLE-205ENST00000521232 FAM24AA6NFZ4 105 aa12.24□□□□□ -0.45
SQLE-205ENST00000521232 IGLL5B9A064 214 aa12.24□□□□□ -0.45
SQLE-205ENST00000521232 MRPS12O15235 138 aaKnown RBP12.24□□□□□ -0.45
SQLE-205ENST00000521232 DUSP14O95147 198 aaKnown RBP12.24□□□□□ -0.45
SQLE-205ENST00000521232 CAV2P51636 162 aa12.24□□□□□ -0.45
SQLE-205ENST00000521232 C1orf158Q8N1D5 194 aa12.24□□□□□ -0.45
SQLE-205ENST00000521232 RNF182Q8N6D2 247 aa12.24□□□□□ -0.45
SQLE-205ENST00000521232 MGST2Q99735 147 aa12.24□□□□□ -0.45
SQLE-205ENST00000521232 IGHV3OR16-12A0A075B7B8 117 aa12.23□□□□□ -0.45
SQLE-205ENST00000521232 TMEM189A5PLL7 270 aa12.23□□□□□ -0.45
SQLE-205ENST00000521232 UPK1BO75841 260 aa12.23□□□□□ -0.45
SQLE-205ENST00000521232 CST7O76096 145 aa12.23□□□□□ -0.45
SQLE-205ENST00000521232 PVALBP20472 110 aaPredicted RBP12.23□□□□□ -0.45
SQLE-205ENST00000521232 LINC00305Q7Z4B0 112 aa12.23□□□□□ -0.45
SQLE-205ENST00000521232 TMEM37Q8WXS4 190 aa12.23□□□□□ -0.45
SQLE-205ENST00000521232 LYRM2Q9NU23 88 aaPredicted RBP12.23□□□□□ -0.45
SQLE-205ENST00000521232 GOLT1BQ9Y3E0 138 aa12.23□□□□□ -0.45
SQLE-205ENST00000521232 RFNGQ9Y644 331 aa12.23□□□□□ -0.45
SQLE-205ENST00000521232 CXCL3P19876 107 aa12.22□□□□□ -0.45
SQLE-205ENST00000521232 CNN1P51911 297 aaKnown RBP12.22□□□□□ -0.45
SQLE-205ENST00000521232 IFITM3Q01628 133 aa12.22□□□□□ -0.45
SQLE-205ENST00000521232 RAB32Q13637 225 aa12.22□□□□□ -0.45
SQLE-205ENST00000521232 VWC2Q2TAL6 325 aa12.22□□□□□ -0.45
SQLE-205ENST00000521232 IGF2BP2-AS1Q96M15 143 aa12.22□□□□□ -0.45
SQLE-205ENST00000521232 AMBPP02760 352 aa12.21□□□□□ -0.45
SQLE-205ENST00000521232 SPART-AS1P0CW21 52 aa12.21□□□□□ -0.45
SQLE-205ENST00000521232 S100A11P31949 105 aa12.21□□□□□ -0.45
SQLE-205ENST00000521232 CAMLGP49069 296 aa12.21□□□□□ -0.45
SQLE-205ENST00000521232 SULT1A1P50225 295 aa12.21□□□□□ -0.45
SQLE-205ENST00000521232 S100A10P60903 97 aa12.21□□□□□ -0.45
SQLE-205ENST00000521232 RAB31Q13636 194 aa12.21□□□□□ -0.45
SQLE-205ENST00000521232 PSG3Q16557 428 aa12.21□□□□□ -0.45
SQLE-205ENST00000521232 ZNF767PQ75MW2 155 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms