RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 C12orf74Q32Q52 190 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 FAM78BQ5VT40 261 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 EBLN2Q6P2I7 272 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 OR4B1Q8NGF8 309 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 SHANK2-AS3Q9BTD1 123 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 RSG1Q9BU20 258 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 SCRT1Q9BWW7 348 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 SLC25A39Q9BZJ4 359 aaPredicted RBP7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 SLC35B3Q9H1N7 401 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 DOK5Q9P104 306 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 HIGD1AQ9Y241 93 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 AGRNO00468 2067 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 IGHV4-4A0A075B6R2 117 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 TRAV8-2A0A0B4J237 113 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 TMEM189A5PLL7 270 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 SMIM9A6NGZ8 99 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 MBPP02686 304 aaPredicted RBP7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 AMBPP02760 352 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 METTL15P1P0C7V9 234 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 LINC00869P0C866 280 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 RRAS2P62070 204 aaPredicted RBP7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 PRR20EP86478 221 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 PRR20CP86479 221 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 PRR20DP86480 221 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 PRR20BP86481 221 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 PRR20AP86496 221 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 AMTNQ6UX39 209 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 RNF126Q9BV68 326 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 NPVFQ9HCQ7 196 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 MGAT4CQ9UBM8 478 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 RFNGQ9Y644 331 aa7.5□□□□□ -1.21
HMGXB3-205ENST00000514469 A0A087X0K7 114 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 C7orf66A4D0T2 115 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 CCSO14618 274 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 HYPMO75409 117 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 TCRBP04435 133 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 RPL7P18124 248 aaKnown RBP7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 RAP2BP61225 183 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 TEPPQ6URK8 271 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 ZNF767PQ75MW2 155 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 C1orf158Q8N1D5 194 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 OR10P1Q8NGE3 313 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 UHRF2Q96PU4 802 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 CCDC32Q9BV29 185 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 NUDT15Q9NV35 164 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 GSKIPQ9P0R6 139 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 DNAH2Q9P225 4427 aa7.49□□□□□ -1.21
HMGXB3-205ENST00000514469 TRAV6A0A075B6T7 132 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 IGHV3OR16-12A0A075B7B8 117 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 DEFB131BA0A096LNP1 70 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 TEX48A0A1B0GUV7 120 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 SLC38A11Q08AI6 406 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 ARL16Q0P5N6 197 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 PXDC1Q5TGL8 231 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 IGFL4Q6B9Z1 124 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 PATE2Q6UY27 113 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 ZNF546Q86UE3 836 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 RNF182Q8N6D2 247 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 ZNF431Q8TF32 576 aaPredicted RBP7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 SEC22CQ9BRL7 303 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 GGACTQ9BVM4 153 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 C11orf1Q9H5F2 150 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 GOLT1BQ9Y3E0 138 aa7.48□□□□□ -1.21
HMGXB3-205ENST00000514469 MRPS12O15235 138 aaKnown RBP7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 DUSP14O95147 198 aaKnown RBP7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 OR5G3P0C626 314 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 SPART-AS1P0CW21 52 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 CNN1P51911 297 aaKnown RBP7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 FGL1Q08830 312 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 ZNF846Q147U1 533 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 LINC00299Q6ZSB3 139 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 S100A7AQ86SG5 101 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 OR11H7Q8NGC8 314 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 IGF2BP2-AS1Q96M15 143 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 MGST2Q99735 147 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 ARL6Q9H0F7 186 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 ARV1Q9H2C2 271 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 DKK2Q9UBU2 259 aa7.47□□□□□ -1.21
HMGXB3-205ENST00000514469 LOC102723971A0A1B0GUV8 181 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 FAM25EA8MYX2 175 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 AGPAT2O15120 278 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 CRXO43186 299 aaPredicted RBP7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 HBE1P02100 147 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 CXCL2P19875 107 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 CXCL3P19876 107 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 EMP1P54849 157 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 FAM222AQ5U5X8 452 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 ZNF738Q8NE65 137 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 RNF24Q9Y225 148 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 LSM5Q9Y4Y9 91 aaKnown RBP7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.22
HMGXB3-205ENST00000514469 BOLA2-SMG1P6H3BVE0 249 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 L7N2F9 121 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 M0R2Z0 102 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 GOSR2O14653 212 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 INSP01308 110 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 H2AFB2P0C5Z0 115 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 VAMP2P63027 116 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 OXA1LQ15070 435 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 SPINK13Q1W4C9 94 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms