RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SFTA3P0C7M3 94 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 PPT1P50897 306 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 TDRG1Q3Y452 100 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 LINC01556Q5JQF7 62 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 PRSS54Q6PEW0 395 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 SPARTQ8N0X7 666 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 SLC35G3Q8N808 338 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 NHLRC2Q8NBF2 726 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 NPIPB3Q92617 1050 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 LINC00477Q96M19 166 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 GABARAPL1Q9H0R8 117 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 EHFQ9NZC4 300 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 DAPK2Q9UIK4 370 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 ANXA10Q9UJ72 324 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 DIMT1Q9UNQ2 313 aaKnown RBP2.07□□□□□ -2.08
CHD1-211ENST00000514344 V9GY05 133 aa2.07□□□□□ -2.08
CHD1-211ENST00000514344 TRAV18A0A075B6X5 111 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 TRGV4A0A0C4DH28 118 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 CORTO00230 105 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 PMP2P02689 132 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 RNASE2P10153 161 aaKnown RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 FCGR1AP12314 374 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 HSPA13P48723 471 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 HSPE1P61604 102 aaKnown RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 SP6Q3SY56 376 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 CNIH2Q6PI25 160 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 Q6ZS49 121 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 Q8N976 141 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 PCNPQ8WW12 178 aaKnown RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 DNAJC30Q96LL9 226 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 RSG1Q9BU20 258 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 FGF20Q9NP95 211 aaPredicted RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 MRPL16Q9NX20 251 aaKnown RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 KIF25-AS1Q9Y6Z4 181 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 TRAV12-3A0A0B4J271 114 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 LOC100131303A0A0U1RQF7 123 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 ZFP92A6NM28 416 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 CIB2O75838 187 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 HOXB6P17509 224 aaKnown RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 DTYMKP23919 212 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 HLA-DMAP28067 261 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 SUB1P53999 127 aaKnown RBP eCLIP2.06□□□□□ -2.08
CHD1-211ENST00000514344 YPEL3P61236 119 aaPredicted RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 ZNF90Q03938 601 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 DAZ2Q13117 558 aaKnown RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 SPHARQ15513 63 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 GFI1BQ5VTD9 330 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 C10orf67Q8IYJ2 551 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 OR1S2Q8NGQ3 325 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 ST6GAL2Q96JF0 529 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 ZNF2Q9BSG1 426 aaPredicted RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 PDCD10Q9BUL8 212 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 MRPL32Q9BYC8 188 aaKnown RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 HEYLQ9NQ87 328 aaPredicted RBP2.06□□□□□ -2.08
CHD1-211ENST00000514344 RAB22AQ9UL26 194 aa2.06□□□□□ -2.08
CHD1-211ENST00000514344 IGKV2D-24A0A075B6R9 120 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 IGKV1OR2-108A0A075B7D4 117 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 EFCAB10A6NFE3 127 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 TOMM40O96008 361 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 ORM2P19652 201 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 CBX5P45973 191 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 TSPAN5P62079 268 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 FABP5Q01469 135 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 FHL2Q14192 279 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 ZNF846Q147U1 533 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 TMEM91Q6ZNR0 172 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 ACOT7LQ6ZUV0 252 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 DAZ4Q86SG3 579 aaKnown RBP2.05□□□□□ -2.08
CHD1-211ENST00000514344 ZNF485Q8NCK3 441 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 ZBTB34Q8NCN2 500 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 LRRC20Q8TCA0 184 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 SLC35E1Q96K37 410 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 ENY2Q9NPA8 101 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 DAZ3Q9NR90 486 aaKnown RBP2.05□□□□□ -2.08
CHD1-211ENST00000514344 KLF12Q9Y4X4 402 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 RNF222A6NCQ9 220 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 SSX5O60225 188 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 PGLYRP1O75594 196 aaPredicted RBP2.05□□□□□ -2.08
CHD1-211ENST00000514344 TAS2R20P59543 309 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 SUPT4H1P63272 117 aaKnown RBP2.05□□□□□ -2.08
CHD1-211ENST00000514344 LAGE3Q14657 143 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 C22orf42Q6IC83 251 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 REG3GQ6UW15 175 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 MS4A15Q8N5U1 240 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 OR8A1Q8NGG7 326 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 ATP6V0E2Q8NHE4 81 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 GTSF1Q8WW33 167 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 PHYHIPQ92561 330 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 UFD1Q92890 307 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 SEC22AQ96IW7 307 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 TXNDC17Q9BRA2 123 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 SLC25A31Q9H0C2 315 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 MRPS18AQ9NVS2 196 aaKnown RBP2.05□□□□□ -2.08
CHD1-211ENST00000514344 PFDN2Q9UHV9 154 aa2.05□□□□□ -2.08
CHD1-211ENST00000514344 TRAV8-3A0A0A6YYJ7 113 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 TRAV8-2A0A0B4J237 113 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 TRAV8-6A0A0B4J262 113 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 IFITM5A6NNB3 132 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 H7C1H1 209 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 ARL6IP5O75915 188 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms