RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 NCOR1O75376 2440 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 IGHV3-43A0A0B4J1X8 118 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 FAM236AA0A1B0GUQ0 79 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 FAM236BA0A1B0GV22 79 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 A8MWP6 167 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 A8MWV9 139 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 BUB1B-PAK6H3BSN5 160 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 TMEM256-PLSCR3K7ERE1 68 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 BPY2O14599 106 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 NDUFB3O43676 98 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 IGLV3-25P01717 112 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 APCSP02743 223 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 CXCL1P09341 107 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 CRYGSP22914 178 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 PSMB8P28062 276 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 FOXA3P55318 350 aaPredicted RBP2.35□□□□□ -2.03
PVT1-202ENST00000512617 LINC00205P59089 165 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 LYZP61626 148 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 UBE2BP63146 152 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 HBBP68871 147 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 RHOGP84095 191 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 MYL5Q02045 173 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 MEF2BQ02080 365 aaPredicted RBP2.35□□□□□ -2.03
PVT1-202ENST00000512617 FAAP20Q6NZ36 180 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 LCN15Q6UWW0 184 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 Q8N7P7 452 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 TMEM105Q8N8V8 129 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 SUMF2Q8NBJ7 301 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 KLHL30-AS1Q8NEE0 82 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 TMEM158Q8WZ71 300 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 RNASE6Q93091 150 aaKnown RBP2.35□□□□□ -2.03
PVT1-202ENST00000512617 SLC25A46Q96AG3 418 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 YPEL2Q96QA6 119 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 B9D2Q9BPU9 175 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 SNHG12Q9BXW3 62 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 GOLGA2P5Q9HBQ8 144 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 SCP2D1Q9UJQ7 156 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 ZNF580Q9UK33 172 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 YLPM1P49750 1951 aaKnown RBP2.35□□□□□ -2.03
PVT1-202ENST00000512617 WDFY4Q6ZS81 3184 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 TSC2P49815 1807 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 DOCK8Q8NF50 2099 aa2.35□□□□□ -2.03
PVT1-202ENST00000512617 PDCD11Q14690 1871 aaKnown RBP2.35□□□□□ -2.03
PVT1-202ENST00000512617 NOTCH4Q99466 2003 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 TRAV27A0A087WT01 109 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 A0A087X0T9 212 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 IGHV3-21A0A0B4J1V1 117 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 A0A0G2JMM0 328 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 A0A1B0GVX0 72 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 A0A1W2PPB8 328 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 OR2T8A6NH00 312 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 KIR3DP1A8MWS1 328 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 LEUTXA8MZ59 168 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 UBFD1O14562 309 aaKnown RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 CDC42EP2O14613 210 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 KRASP01116 189 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 IGLV2-11P01706 119 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 HIST1H1DP16402 221 aaKnown RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 CRHBPP24387 322 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 ZNF93P35789 620 aaPredicted RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 DYNLT3P51808 116 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 CRISP3P54108 245 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 TPPP2P59282 170 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 S100A10P60903 97 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 PLGLB1Q02325 96 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 DPTQ07507 201 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 HSD52Q0P140 79 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 Q1RN00 199 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 LINC01554Q52M75 96 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 SPANXN3Q5MJ09 141 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 ZNF678Q5SXM1 525 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 ZNF880Q6PDB4 577 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 CRIP3Q6Q6R5 217 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 ZNF767PQ75MW2 155 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 GKN2Q86XP6 184 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 AMN1Q8IY45 258 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 C9orf62Q8N4C0 152 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 CD177Q8N6Q3 437 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 OR10AC1Q8NH08 325 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 ITLN2Q8WWU7 325 aaPredicted RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 CIB3Q96Q77 187 aaPredicted RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 SDF2Q99470 211 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 LITAFQ99732 161 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 OPRPNQ99935 248 aaPredicted RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 MIEN1Q9BRT3 115 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 SPANXDQ9BXN6 97 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 MRPL32Q9BYC8 188 aaKnown RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 KRTAP4-7Q9BYR0 210 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 DEFB126Q9BYW3 111 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 PLA2G12AQ9BZM1 189 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 TMEM133Q9H2Q1 129 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 RPP21Q9H633 154 aaKnown RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 ZNF556Q9HAH1 456 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 ZNF586Q9NXT0 402 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 SNX12Q9UMY4 172 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 KLK5Q9Y337 293 aaPredicted RBP2.34□□□□□ -2.03
PVT1-202ENST00000512617 PHLDA3Q9Y5J5 127 aa2.34□□□□□ -2.03
PVT1-202ENST00000512617 PKD1L2Q7Z442 2459 aa2.34□□□□□ -2.04
PVT1-202ENST00000512617 DSPPQ9NZW4 1301 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms