RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TOMM40O96008 361 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 SLC25A5P05141 298 aaKnown RBP8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 NBEAP1P0C6P0 100 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 EFNA4P52798 201 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 RCHY1Q96PM5 261 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 RNF24Q9Y225 148 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 FBN2P35556 2912 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 A0A1W2PPI3 338 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 A0A1W2PRD5 423 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 A0A1W2PRF3 423 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 A0A1W2PRM7 423 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 PGPA6NDG6 321 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 LY6LH3BQJ8 138 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 LINC00614P0C842 121 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 SLAQ13239 276 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 FAM168AQ92567 244 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 ALKBH7Q9BT30 221 aaPredicted RBP8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 BPESC1Q9GZL8 116 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 C7orf69Q9H7B7 122 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 A0A1B0GXF2 115 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 IGLC2P0DOY2 106 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 IGLC3P0DOY3 106 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 RPL27AP46776 148 aaKnown RBP8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 SSBP2P81877 361 aaPredicted RBP8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 MMDQ15546 238 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 HCP5Q6MZN7 132 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 LHFPL4Q7Z7J7 247 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 NHLRC2Q8NBF2 726 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 LINC00479Q96M42 142 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 RNF5Q99942 180 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 SRSF8Q9BRL6 282 aaKnown RBP8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 MLST8Q9BVC4 326 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 PRSS22Q9GZN4 317 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 RPP21Q9H633 154 aaKnown RBP8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 GOLT1BQ9Y3E0 138 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 HILPDAQ9Y5L2 63 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 IGLC7A0M8Q6 106 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 M0R1W7 72 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 OVOL3O00110 214 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 TIMM23O14925 209 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 APELAP0DMC3 54 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 BTF3P20290 206 aaKnown RBP8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 HBBP68871 147 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 OR11H6Q8NGC7 330 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 OR1B1Q8NGR6 318 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 DAZAP1Q96EP5 407 aaKnown RBP8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 TMEM208Q9BTX3 173 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 C1RLQ9NZP8 487 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 TMEM14CQ9P0S9 112 aa8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 MRPS16Q9Y3D3 137 aaKnown RBP8.75□□□□□ -1.01
SH3RF1-203ENST00000508685 TRAV34A0A0B4J273 112 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 TRBV6-1A0A0K0K1D8 114 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 M0R2Z0 102 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 CA1P00915 261 aaPredicted RBP8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 LTAP01374 205 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 IGHV4-39P01824 125 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 CRYGBP07316 175 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 ORM2P19652 201 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 NTF3P20783 257 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 CD24P25063 80 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 G0S2P27469 103 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 HTR1DP28221 377 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 VMO1Q7Z5L0 202 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 TXN2Q99757 166 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 LPAR2Q9HBW0 351 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 PPP1R14DQ9NXH3 145 aa8.74□□□□□ -1.01
SH3RF1-203ENST00000508685 TRAV9-2A0A087WT02 112 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 FAM181BA6NEQ2 426 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 P01737 135 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 PRTN3P24158 256 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 TNXAQ16473 311 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 FBLN7Q53RD9 439 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 PRR27Q6MZM9 219 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 OTORQ9NRC9 128 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 ZFP30Q9Y2G7 519 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 SIGLEC9Q9Y336 463 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 C19orf71A6NCJ1 209 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 ODF3BA8MYP8 253 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 MOSP00540 346 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 IGHV3-48P01763 117 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 TCRAP04437 139 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 GP9P14770 177 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 Q6ZN92 141 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 RBPMS2Q6ZRY4 209 aaKnown RBP8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 FAM19A2Q8N3H0 131 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 FBXL15Q9H469 300 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 DPM3Q9P2X0 92 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 HIGD1AQ9Y241 93 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 RNF114Q9Y508 228 aa8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 F11RQ9Y624 299 aaKnown RBP8.73□□□□□ -1.01
SH3RF1-203ENST00000508685 POLQO75417 2590 aa8.72□□□□□ -1.01
SH3RF1-203ENST00000508685 OR5AL1P0C617 328 aa8.72□□□□□ -1.01
SH3RF1-203ENST00000508685 GDF5OSQ5U4N7 250 aa8.72□□□□□ -1.01
SH3RF1-203ENST00000508685 S100A7AQ86SG5 101 aa8.72□□□□□ -1.01
SH3RF1-203ENST00000508685 PPP1R27Q86WC6 154 aa8.72□□□□□ -1.01
SH3RF1-203ENST00000508685 BLNKQ8WV28 456 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms