RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RRN3P1Q2M238 152 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 SP6Q3SY56 376 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 GSG1LQ6UXU4 331 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 FOXI2Q6ZQN5 318 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 C1orf158Q8N1D5 194 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 TP53RKQ96S44 253 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 TMEM222Q9H0R3 208 aa6.59□□□□□ -1.35
NEDD9-211ENST00000508546 SAV1Q9H4B6 383 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-211ENST00000508546 RPS10-NUDT3A0A1W2PQS6 291 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 G3V3Q6 166 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 B3GALNT1O75752 331 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 IGKV1-5P01602 117 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 IGKV3-20P01619 116 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 HOXB5P09067 269 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 BTF3P20290 206 aaKnown RBP6.58□□□□□ -1.36
NEDD9-211ENST00000508546 CCL18P55774 89 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 USF2Q15853 346 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-211ENST00000508546 Q5VSD8 79 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 SPATA31B1PQ5VZV4 182 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 LGI3Q8N145 548 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 LRTM2Q8N967 370 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 GLYATL2Q8WU03 294 aa6.58□□□□□ -1.36
NEDD9-211ENST00000508546 PIGBOS1A0A0B4J2F0 54 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 DUXBA0A1W2PPF3 345 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 IL4P05112 153 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 SLC25A4P12235 298 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 UCP1P25874 307 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 OR10J1P30954 320 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 NUP62P37198 522 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-211ENST00000508546 ID1P41134 155 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 HTR2BP41595 481 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 PSMB3P49720 205 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 RND2P52198 227 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 AKR1C2P52895 323 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 PAX9P55771 341 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 DEFB1P60022 68 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 CYCSP99999 105 aaKnown RBP6.57□□□□□ -1.36
NEDD9-211ENST00000508546 PSG9Q00887 426 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 FGL1Q08830 312 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 LRRC37A5PQ49AS3 106 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 TMEM268Q5VZI3 342 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 PRSS54Q6PEW0 395 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 OR4B1Q8NGF8 309 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 RBPMSQ93062 196 aaKnown RBP6.57□□□□□ -1.36
NEDD9-211ENST00000508546 IL22RA2Q969J5 263 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 NMES1Q9C002 83 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 SLC35B3Q9H1N7 401 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 ENY2Q9NPA8 101 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 LINC00588Q9Y4M8 146 aa6.57□□□□□ -1.36
NEDD9-211ENST00000508546 FXYD6-FXYD2A0A087WZ82 144 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 LYRM9A8MSI8 78 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 A8MTW9 85 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 J3QL48 77 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 ATG12O94817 140 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 TOMM40O96008 361 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 IAH1Q2TAA2 248 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-211ENST00000508546 Q5BKY6 102 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 TTC32Q5I0X7 151 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 GGNBP1Q5YKI7 109 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 LYZL2Q7Z4W2 148 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 C9orf62Q8N4C0 152 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 OR11H4Q8NGC9 324 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 LHFPL5Q8TAF8 219 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 RNASEH2CQ8TDP1 164 aaKnown RBP6.56□□□□□ -1.36
NEDD9-211ENST00000508546 PPP1R1CQ8WVI7 109 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 C2orf50Q96LR7 162 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 LINC00052Q96N35 136 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 MAGT1Q9H0U3 335 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 HSPB11Q9Y547 144 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 TMEM56-RWDD3S4R434 201 aa6.56□□□□□ -1.36
NEDD9-211ENST00000508546 SOCS3O14543 225 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 ARPC5O15511 151 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 MPC2O95563 127 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 CDS2O95674 445 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 NUDT3O95989 172 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 PET100P0DJ07 73 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 RD3LP0DJH9 198 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 SPCS3P61009 180 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 AARDQ4LEZ3 155 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 C2orf83Q53S99 150 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 FAM78BQ5VT40 261 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 SELENOHQ8IZQ5 122 aaKnown RBP6.55□□□□□ -1.36
NEDD9-211ENST00000508546 THAP6Q8TBB0 222 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 IGF2BP2-AS1Q96M15 143 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 Q9H8V8 135 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 PFDN2Q9UHV9 154 aa6.55□□□□□ -1.36
NEDD9-211ENST00000508546 A0A0J9YX75 114 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 HMSDA8MTL9 139 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 F5H768 121 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 ISLRO14498 428 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 NXPH3O95157 252 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 PSG1P11464 419 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 TSPOP30536 169 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 S100A10P60903 97 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 NMSQ5H8A3 153 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 OR8G2PQ6IF36 304 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 ETFRF1Q6IPR1 90 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 EBLN2Q6P2I7 272 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 SSX7Q7RTT5 188 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms