RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 SMCPP49901 116 aaPredicted RBP5.83□□□□□ -1.48
LIMCH1-207ENST00000508466 FOXI1Q12951 378 aa5.83□□□□□ -1.48
LIMCH1-207ENST00000508466 DIAPH2-AS1Q14236 149 aa5.83□□□□□ -1.48
LIMCH1-207ENST00000508466 MRPL23Q16540 153 aaKnown RBP5.83□□□□□ -1.48
LIMCH1-207ENST00000508466 C5orf64Q2M2E5 130 aa5.83□□□□□ -1.48
LIMCH1-207ENST00000508466 ZC2HC1BQ5TFG8 222 aa5.83□□□□□ -1.48
LIMCH1-207ENST00000508466 SPINK14Q6IE38 97 aa5.83□□□□□ -1.48
LIMCH1-207ENST00000508466 RBMXL3Q8N7X1 1067 aaKnown RBP5.83□□□□□ -1.48
LIMCH1-207ENST00000508466 TMEM30CPA0ZSE6 113 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 SCGB1A1P11684 91 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 PCBD1P61457 104 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 GAGE5Q13069 117 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 GAGE6Q13070 117 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 ODF1Q14990 250 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 C12orf74Q32Q52 190 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 SLC25A53Q5H9E4 307 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 C10orf113Q5VZT2 155 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 IGFL4Q6B9Z1 124 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 Q6ZQT7 251 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 WIPF2Q8TF74 440 aaPredicted RBP5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 IFI27L1Q96BM0 104 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 EPDR1Q9UM22 224 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 TMEM189A5PLL7 270 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A10PA6NDY2 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A18PA6NE21 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A16PA6NEW6 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A20PA6NIJ5 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A8PA6NJQ4 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A7PA6NKC0 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A22PA8MWA6 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A12PA8MX19 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A5PA8MXJ8 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A23PA8MXZ1 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A15PP0C7V4 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A13PP0C7W8 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A14PP0C7W9 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM90A24PP0C7X0 464 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 CYB561P49447 251 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 ZNF562Q6V9R5 426 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 RBPMS2Q6ZRY4 209 aaKnown RBP5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 C8orf46Q8TAG6 207 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 FOXC2Q99958 501 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 ERG28Q9UKR5 140 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 LINC00312Q9Y6C7 94 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 ZDBF2Q9HCK1 2354 aa5.82□□□□□ -1.48
LIMCH1-207ENST00000508466 IGHV3OR16-8A0A075B7F1 116 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 TMEM265A0A087WTH1 108 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 NDUFS7O75251 213 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 DLX1P56177 255 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 PLP2Q04941 152 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 PDPNQ86YL7 162 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 TMEM75Q8N9X5 138 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 PHLDA1Q8WV24 401 aaPredicted RBP5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 OCIAD1Q9NX40 245 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 DOPEY2Q9Y3R5 2298 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 VSTM5A8MXK1 200 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 F8W1H4 67 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 J3QT63 122 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 RBP4P02753 201 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 MPV17P39210 176 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 EIF4EBP1Q13541 118 aaPredicted RBP5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 TCTEX1D4Q5JR98 221 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 GGNQ86UU5 652 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 GPR82Q96P67 336 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 ARHGAP32A7KAX9 2087 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 ZFHX3Q15911 3703 aa5.81□□□□□ -1.48
LIMCH1-207ENST00000508466 M0R3E3 92 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 SP1P08047 785 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 NHLRC4P0CG21 123 aaPredicted RBP5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 HLA-DRB4P13762 266 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 EMP1P54849 157 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 HSPE1P61604 102 aaKnown RBP5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 SPRNQ5BIV9 151 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 MDP1Q86V88 176 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 GCSAMQ8N6F7 178 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 PPP1R35Q8TAP8 253 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 IGFBPL1Q8WX77 278 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 CARD19Q96LW7 228 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 PRDM14Q9GZV8 571 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 HLA-DRB4X5D2U9 266 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 PIEZO2Q9H5I5 2752 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 IGHV3-72A0A0B4J1Y9 119 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 TRAV4A0A0B4J268 109 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 A6NJY4 79 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 C2CD4DB7Z1M9 353 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 NPYP01303 97 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 FAM159AQ6UWV7 190 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 OR4X2Q8NGF9 303 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 FXYD5Q96DB9 178 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 A0A1W2PPC4 97 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 TMEM8BA6NDV4 472 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 OOEPA6NGQ2 149 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 LINC01549A6NIU2 74 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 E9PLD3 99 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 M0QXV9 152 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 LYZL6O75951 148 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 LEPP41159 167 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 LOXL3P58215 753 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 ZNF146Q15072 292 aa5.8□□□□□ -1.48
LIMCH1-207ENST00000508466 COLCA1Q6ZS62 124 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms