RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 MIC13Q5XKP0 118 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 APRG1Q8IVJ8 170 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 OR2T35Q8NGX2 323 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 SCGB1C1Q8TD33 95 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 UHRF2Q96PU4 802 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 CITED4Q96RK1 184 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 SPATA25Q9BR10 227 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 WDR61Q9GZS3 305 aaKnown RBP11.13□□□□□ -0.63
RNF4-210ENST00000508235 PXMP4Q9Y6I8 212 aa11.13□□□□□ -0.63
RNF4-210ENST00000508235 ATF4P18848 351 aaPredicted RBP11.12□□□□□ -0.63
RNF4-210ENST00000508235 PSMB3P49720 205 aa11.12□□□□□ -0.63
RNF4-210ENST00000508235 PATE2Q6UY27 113 aa11.12□□□□□ -0.63
RNF4-210ENST00000508235 FAM24BQ8N5W8 94 aa11.12□□□□□ -0.63
RNF4-210ENST00000508235 INO80EQ8NBZ0 244 aaPredicted RBP11.12□□□□□ -0.63
RNF4-210ENST00000508235 GATAD1Q8WUU5 269 aa11.12□□□□□ -0.63
RNF4-210ENST00000508235 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
RNF4-210ENST00000508235 TM2D3Q9BRN9 247 aa11.12□□□□□ -0.63
RNF4-210ENST00000508235 PARD6GQ9BYG4 376 aaPredicted RBP11.12□□□□□ -0.63
RNF4-210ENST00000508235 U3KQK5 164 aa11.12□□□□□ -0.63
RNF4-210ENST00000508235 KIR2DL5BA0A0G2JN68 375 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 KIR2DL5BA0A0G2JPC4 375 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 ISLRO14498 428 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 PSMG4Q5JS54 123 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 LEMD1Q68G75 181 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 KIR2DL5AQ8N109 375 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 KIR2DL5BQ8NHK3 375 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 RSG1Q9BU20 258 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 SMIM3Q9BZL3 60 aa11.11□□□□□ -0.63
RNF4-210ENST00000508235 UBE2CO00762 179 aa11.1□□□□□ -0.63
RNF4-210ENST00000508235 ZNF266Q14584 549 aa11.1□□□□□ -0.63
RNF4-210ENST00000508235 BPIFA4PQ86YQ2 179 aa11.1□□□□□ -0.63
RNF4-210ENST00000508235 STHQ8IWL8 128 aa11.1□□□□□ -0.63
RNF4-210ENST00000508235 FXYD6-FXYD2A0A087WZ82 144 aa11.09□□□□□ -0.63
RNF4-210ENST00000508235 A0A087X0K7 114 aa11.09□□□□□ -0.63
RNF4-210ENST00000508235 SOCS3O14543 225 aa11.09□□□□□ -0.63
RNF4-210ENST00000508235 ZNF124Q15973 351 aa11.09□□□□□ -0.63
RNF4-210ENST00000508235 Q5BKY6 102 aa11.09□□□□□ -0.63
RNF4-210ENST00000508235 C16orf92Q96LL3 132 aa11.09□□□□□ -0.63
RNF4-210ENST00000508235 RCHY1Q96PM5 261 aa11.09□□□□□ -0.63
RNF4-210ENST00000508235 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
RNF4-210ENST00000508235 CXCL2P19875 107 aa11.08□□□□□ -0.64
RNF4-210ENST00000508235 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
RNF4-210ENST00000508235 TNFSF18Q9UNG2 199 aa11.08□□□□□ -0.64
RNF4-210ENST00000508235 DNAH3Q8TD57 4116 aa11.07□□□□□ -0.64
RNF4-210ENST00000508235 ACTL10Q5JWF8 245 aa11.07□□□□□ -0.64
RNF4-210ENST00000508235 SPATA31B1PQ5VZV4 182 aa11.07□□□□□ -0.64
RNF4-210ENST00000508235 MORN3Q6PF18 240 aaPredicted RBP11.07□□□□□ -0.64
RNF4-210ENST00000508235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.07□□□□□ -0.64
RNF4-210ENST00000508235 Q6ZWC4 215 aa11.07□□□□□ -0.64
RNF4-210ENST00000508235 LRRC20Q8TCA0 184 aa11.07□□□□□ -0.64
RNF4-210ENST00000508235 CSTL1Q9H114 145 aa11.07□□□□□ -0.64
RNF4-210ENST00000508235 RPRMQ9NS64 109 aa11.07□□□□□ -0.64
RNF4-210ENST00000508235 SPP1P10451 314 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 GUK1Q16774 197 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 TMEM41BQ5BJD5 291 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 FAM78BQ5VT40 261 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 LCN15Q6UWW0 184 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 FOXI2Q6ZQN5 318 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 TRPT1Q86TN4 253 aaKnown RBP11.06□□□□□ -0.64
RNF4-210ENST00000508235 SLC50A1Q9BRV3 221 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 MRPL32Q9BYC8 188 aaKnown RBP11.06□□□□□ -0.64
RNF4-210ENST00000508235 WFDC1Q9HC57 220 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 TIMM9Q9Y5J7 89 aa11.06□□□□□ -0.64
RNF4-210ENST00000508235 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 KNCNA6PVL3 124 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 MRPS12O15235 138 aaKnown RBP11.05□□□□□ -0.64
RNF4-210ENST00000508235 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
RNF4-210ENST00000508235 FFAR4Q5NUL3 377 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 MORN5Q5VZ52 161 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 EBLN2Q6P2I7 272 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 Q6ZNX1 250 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 HRH4Q9H3N8 390 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 TP53TG1Q9Y2A0 90 aa11.05□□□□□ -0.64
RNF4-210ENST00000508235 RNF222A6NCQ9 220 aa11.04□□□□□ -0.64
RNF4-210ENST00000508235 G3V3Q6 166 aa11.04□□□□□ -0.64
RNF4-210ENST00000508235 ARPC5O15511 151 aa11.04□□□□□ -0.64
RNF4-210ENST00000508235 HLA-DRB4P13762 266 aa11.04□□□□□ -0.64
RNF4-210ENST00000508235 C17orf77Q96MU5 243 aa11.04□□□□□ -0.64
RNF4-210ENST00000508235 MFFQ9GZY8 342 aa11.04□□□□□ -0.64
RNF4-210ENST00000508235 SAV1Q9H4B6 383 aaPredicted RBP11.04□□□□□ -0.64
RNF4-210ENST00000508235 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
RNF4-210ENST00000508235 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
RNF4-210ENST00000508235 TRAV5A0A0B4J249 113 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 H3BMM0 161 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 TAAR5O14804 337 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 ZNF253O75346 499 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 IGLC2P0DOY2 106 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 RHOBP62745 196 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 ACOT6Q3I5F7 207 aaPredicted RBP11.03□□□□□ -0.64
RNF4-210ENST00000508235 GCSAMLQ5JQS6 135 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 ZNF738Q8NE65 137 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 WWC2-AS2Q96NR7 200 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 CLUHP3Q96NS8 147 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 ZNF331Q9NQX6 463 aaPredicted RBP11.03□□□□□ -0.64
RNF4-210ENST00000508235 FUT9Q9Y231 359 aa11.03□□□□□ -0.64
RNF4-210ENST00000508235 AGRNO00468 2067 aa11.02□□□□□ -0.64
RNF4-210ENST00000508235 SPRY2O43597 315 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms