RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MUC7Q8TAX7 377 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 TP53TG1Q9Y2A0 90 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 STARD9Q9P2P6 4700 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 MRPS12O15235 138 aaKnown RBP13.05□□□□□ -0.32
SMN1-204ENST00000506163 SNRPD3P62318 126 aaKnown RBP13.05□□□□□ -0.32
SMN1-204ENST00000506163 HBG1P69891 147 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 HBG2P69892 147 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 FCN2Q15485 313 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 STHQ8IWL8 128 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 OR5C1Q8NGR4 320 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 LINC00052Q96N35 136 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 KMT2CQ8NEZ4 4911 aaKnown RBP13.04□□□□□ -0.32
SMN1-204ENST00000506163 TRAV8-2A0A0B4J237 113 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 C4BPBP20851 252 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 GALR1P47211 349 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 ATP6V1FQ16864 119 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 CHAC2Q8WUX2 184 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 H3BMM0 161 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 CA1P00915 261 aaPredicted RBP13.03□□□□□ -0.32
SMN1-204ENST00000506163 FGF7P21781 194 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 PSMB3P49720 205 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 BAXQ07812 192 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 OPCMLQ14982 345 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 PXDC1Q5TGL8 231 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 LINC00305Q7Z4B0 112 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 THAP6Q8TBB0 222 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 SLC25A31Q9H0C2 315 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 MBD2Q9UBB5 411 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 ISLRO14498 428 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 RPL29P47914 159 aaKnown RBP13.02□□□□□ -0.33
SMN1-204ENST00000506163 CLINT1Q14677 625 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 OXA1LQ15070 435 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 GPR82Q96P67 336 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 SLC39A9Q9NUM3 307 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 F6UB75 175 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 C3orf84H3BNL1 204 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 LYL1P12980 280 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 ID1P41134 155 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 RAB31Q13636 194 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 Q5BKY6 102 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 CASC10Q5T4H9 136 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 MED28Q9H204 178 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 DNAJC4Q9NNZ3 241 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 TRAV5A0A0B4J249 113 aa13□□□□□ -0.33
SMN1-204ENST00000506163 COX7A2P2O60397 106 aa13□□□□□ -0.33
SMN1-204ENST00000506163 SNRPCP09234 159 aaKnown RBP13□□□□□ -0.33
SMN1-204ENST00000506163 HLA-DRB4P13762 266 aa13□□□□□ -0.33
SMN1-204ENST00000506163 RPL7P18124 248 aaKnown RBP13□□□□□ -0.33
SMN1-204ENST00000506163 B2MP61769 119 aa13□□□□□ -0.33
SMN1-204ENST00000506163 RGS21Q2M5E4 152 aa13□□□□□ -0.33
SMN1-204ENST00000506163 C10orf113Q5VZT2 155 aa13□□□□□ -0.33
SMN1-204ENST00000506163 C16orf92Q96LL3 132 aa13□□□□□ -0.33
SMN1-204ENST00000506163 NPCDR1Q9BY65 106 aa13□□□□□ -0.33
SMN1-204ENST00000506163 SAV1Q9H4B6 383 aaPredicted RBP13□□□□□ -0.33
SMN1-204ENST00000506163 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
SMN1-204ENST00000506163 ELOA3CA0A087WX78 387 aaPredicted RBP12.99□□□□□ -0.33
SMN1-204ENST00000506163 A0A0J9YWU9 116 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 RPL12P30050 165 aaKnown RBP12.99□□□□□ -0.33
SMN1-204ENST00000506163 S100A7P31151 101 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 MEOX2P50222 304 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 FGL1Q08830 312 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 ZFAND6Q6FIF0 208 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 RNF182Q8N6D2 247 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 CSNK1G2-AS1Q8NCQ2 148 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 WFDC1Q9HC57 220 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 CLEC5AQ9NY25 188 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 HSPB11Q9Y547 144 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 PXMP4Q9Y6I8 212 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 A0A087X0K7 114 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
SMN1-204ENST00000506163 SPP1P10451 314 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 HLA-DMBP28068 263 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 Q6ZRG5 221 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 GATAD1Q8WUU5 269 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 WDR61Q9GZS3 305 aaKnown RBP12.98□□□□□ -0.33
SMN1-204ENST00000506163 MPDU1O75352 247 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 IGKV3-20P01619 116 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 PET100P0DJ07 73 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
SMN1-204ENST00000506163 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
SMN1-204ENST00000506163 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 RARRES2Q99969 163 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 SMIM3Q9BZL3 60 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 A0A0J9YX75 114 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 H3BQ15 152 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 H3BTX0 84 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 ATP5SQ99766 215 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 RFNGQ9Y644 331 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.34
SMN1-204ENST00000506163 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.34
SMN1-204ENST00000506163 IGLC2P0DOY2 106 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 FXYD7P58549 80 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 FAM78BQ5VT40 261 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 SAMD13Q5VXD3 122 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 S100A7AQ86SG5 101 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 ZNF709Q8N972 641 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms