RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TM2D1Q9BX74 207 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 POLR2J2Q9GZM3 115 aaKnown RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 DEFB127Q9H1M4 99 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM60AQ9NP50 221 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 DAZ1Q9NQZ3 744 aaKnown RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 CYTL1Q9NRR1 136 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 MARCOQ9UEW3 520 aaPredicted RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 PKIGQ9Y2B9 76 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 DNAJC15Q9Y5T4 150 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SERP1Q9Y6X1 66 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 RGPD3A6NKT7 1758 aaPredicted RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SIPA1L3O60292 1781 aaPredicted RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 ARFGEF2Q9Y6D5 1785 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 DDX60LQ5H9U9 1706 aaKnown RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 LMO7Q8WWI1 1683 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 NHSL1Q5SYE7 1610 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 ADAMTSL1Q8N6G6 1762 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 DSPPQ9NZW4 1301 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 A0A0G2JMZ2 1700 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 LRRC37A2A6NM11 1700 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 LRRC37AA6NMS7 1700 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 LY75O60449 1722 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 C4AP0C0L4 1744 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 C4BP0C0L5 1744 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 TOGARAM1Q9Y4F4 1720 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 HELZP42694 1942 aaKnown RBP1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 A0A0A6YYD4 124 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRGV5A0A0B4J1U4 118 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV13-1A0A0B4J241 112 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 IGHV1-58A0A0C4DH39 117 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 KLF18A0A0U1RQI7 1052 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZFP92A6NM28 416 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 A8MWV9 139 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 E9PLD3 99 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 C11orf98E9PRG8 122 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 LINC01619G3V211 115 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 LGALS9O00182 355 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 ATOX1O00244 68 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 GNGT2O14610 69 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 LYZL6O75951 148 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 SOD1P00441 154 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 GYPBP06028 91 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 ACYP1P07311 99 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 HLA-DRB4P13762 266 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 VDAC1P21796 283 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 DUTP33316 252 aaKnown RBP1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 MPV17P39210 176 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 PPICP45877 212 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 MTPNP58546 118 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 TAS2R45P59539 299 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 PPP1CAP62136 330 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 SNRPGP62308 76 aaKnown RBP1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 FKBP1AP62942 108 aaKnown RBP1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 CDK5R1Q15078 307 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 CST6Q15828 149 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 IGFBP7Q16270 282 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 ECSCRQ19T08 205 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 MPV17LQ2QL34 196 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM78AQ5JUQ0 283 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 C1orf140Q5VVS0 124 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 C12orf73Q69YU5 71 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 IGFL2Q6UWQ7 119 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 DGAT2L6Q6ZPD8 337 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM136Q6ZRR5 245 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q6ZS49 121 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 CYP2G1PQ6ZSU1 146 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 BPIFA4PQ86YQ2 179 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 MMD2Q8IY49 270 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 EXOC3-AS1Q8N2X6 119 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 NPWQ8N729 165 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR2T10Q8NGZ9 312 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 SSC4DQ8WTU2 575 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 GTSF1Q8WW33 167 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 LSM10Q969L4 123 aaKnown RBP1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 KCNS1Q96KK3 526 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 C2orf48Q96LS8 159 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM218AQ96MZ4 157 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 PRELID3AQ96N28 172 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR2A5Q96R48 311 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 NMNAT3Q96T66 252 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 MGST2Q99735 147 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 PRSS27Q9BQR3 290 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 SHANK2-AS3Q9BTD1 123 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 APOOQ9BUR5 198 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 PLA2G2FQ9BZM2 168 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 AICDAQ9GZX7 198 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 AGPAT4-IT1Q9H0P7 198 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF331Q9NQX6 463 aaPredicted RBP1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC39A9Q9NUM3 307 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 C21orf62Q9NYP8 219 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF581Q9P0T4 197 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 TAAR3PQ9P1P4 343 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 HIGD1BQ9P298 99 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 HES2Q9Y543 173 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 PXMP4Q9Y6I8 212 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 HLA-DRB4X5D2U9 266 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 SCN7AQ01118 1682 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 NRXN3Q9Y4C0 1643 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 AFDNP55196 1824 aaKnown RBP1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 STRCP1A6NGW2 1772 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms