RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 MYCNOSP40205 109 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 TMEM95Q3KNT9 176 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 MORN5Q5VZ52 161 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 REC114Q7Z4M0 266 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 C4orf3Q8WVX3 66 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 SMR3AQ99954 134 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 RARRES2Q99969 163 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 NIPSNAP3BQ9BS92 247 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 TMEM231Q9H6L2 316 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 DAZ1Q9NQZ3 744 aaKnown RBP6.99□□□□□ -1.29
NR1I3-216ENST00000502848 UFC1Q9Y3C8 167 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 LY96Q9Y6Y9 160 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 S4R3C0 116 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 HIVEP2P31629 2446 aa6.99□□□□□ -1.29
NR1I3-216ENST00000502848 SVEP1Q4LDE5 3571 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 NOTCH2Q04721 2471 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 TRBV19A0A075B6N1 114 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 SERTM2A0A1B0GWG4 89 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 CLPSL1A2RUU4 121 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 B4DEV8 164 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 C9JQL5 133 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
NR1I3-216ENST00000502848 BUB3O43684 328 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 IGHV3-23P01764 117 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 S100A9P06702 114 aaKnown RBP6.98□□□□□ -1.29
NR1I3-216ENST00000502848 ADCYAP1P18509 176 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 GALR1P47211 349 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 DEFA5Q01523 94 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 RHEBQ15382 184 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 CST9LP1Q5W188 147 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 FAM90A2PQ658T7 463 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 ZNF329Q86UD4 541 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 CYB561D1Q8N8Q1 229 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 C5orf17Q8NAS9 161 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 HIST1H2BAQ96A08 127 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 SMIM12Q96EX1 92 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 GRAMD2BQ96HH9 432 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 OTORQ9NRC9 128 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 PRELID1Q9Y255 219 aa6.98□□□□□ -1.29
NR1I3-216ENST00000502848 YTHDF2Q9Y5A9 579 aaKnown RBP6.98□□□□□ -1.29
NR1I3-216ENST00000502848 TRAV5A0A0B4J249 113 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
NR1I3-216ENST00000502848 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 C9JCJ5 164 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 INAFM1C9JVW0 142 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 APOC3P02656 99 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 RPLP1P05386 114 aaKnown RBP6.97□□□□□ -1.29
NR1I3-216ENST00000502848 OR10J4P0C629 311 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 PSG9Q00887 426 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 LINC01006Q8NI28 216 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 CELSR1Q9NYQ6 3014 aa6.97□□□□□ -1.29
NR1I3-216ENST00000502848 TRBV6-1A0A0K0K1D8 114 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 PPP5D1E7EU14 171 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 PYYP10082 97 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 ATP5G3P48201 142 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 TAS2R60P59551 318 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 UBE2G2P60604 165 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 RPEL1Q2QD12 228 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 C1QL4Q86Z23 238 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 OR8I2Q8N0Y5 310 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 C2CD4CQ8TF44 421 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
NR1I3-216ENST00000502848 DUX5Q96PT3 197 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 PARLQ9H300 379 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
NR1I3-216ENST00000502848 TLN2Q9Y4G6 2542 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 A0A087WWC5 75 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 HELTA6NFD8 242 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 H3BQ15 152 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 TRBV12-3P01733 135 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 IGHV3-11P01762 117 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 ATF4P18848 351 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-216ENST00000502848 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
NR1I3-216ENST00000502848 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 C16orf54Q6UWD8 224 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 ATG101Q9BSB4 218 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 AAMDCQ9H7C9 122 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 ZNF586Q9NXT0 402 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 EPDR1Q9UM22 224 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 KLF12Q9Y4X4 402 aa6.95□□□□□ -1.3
NR1I3-216ENST00000502848 TSSC4Q9Y5U2 329 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-216ENST00000502848 ACANP16112 2415 aa6.94□□□□□ -1.3
NR1I3-216ENST00000502848 IGHV7-4-1A0A0J9YVY3 117 aa6.94□□□□□ -1.3
NR1I3-216ENST00000502848 LINC01619G3V211 115 aa6.94□□□□□ -1.3
NR1I3-216ENST00000502848 K7EQM0 130 aa6.94□□□□□ -1.3
NR1I3-216ENST00000502848 PEX7O00628 323 aa6.94□□□□□ -1.3
NR1I3-216ENST00000502848 EIF3GO75821 320 aaKnown RBP eCLIP6.94□□□□□ -1.3
NR1I3-216ENST00000502848 NDUFB4O95168 129 aa6.94□□□□□ -1.3
NR1I3-216ENST00000502848 CNN1P51911 297 aaKnown RBP6.94□□□□□ -1.3
NR1I3-216ENST00000502848 PROK1P58294 105 aa6.94□□□□□ -1.3
NR1I3-216ENST00000502848 FHL3Q13643 280 aa6.94□□□□□ -1.3
NR1I3-216ENST00000502848 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms