RNA–Protein interactions for RNA: ENST00000502804.2

CXCL1P1-201, Transcript of C-X-C motif chemokine ligand 1 pseudogene 1, humanhuman

BASIC

Gene CXCL1P1, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P1-201ENST00000502804 PSMG4Q5JS54 123 aa12.54□□□□□ -0.4
CXCL1P1-201ENST00000502804 C10orf113Q5VZT2 155 aa12.54□□□□□ -0.4
CXCL1P1-201ENST00000502804 LINC00305Q7Z4B0 112 aa12.54□□□□□ -0.4
CXCL1P1-201ENST00000502804 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
CXCL1P1-201ENST00000502804 ATP5SQ99766 215 aa12.54□□□□□ -0.4
CXCL1P1-201ENST00000502804 RSG1Q9BU20 258 aa12.54□□□□□ -0.4
CXCL1P1-201ENST00000502804 NPCDR1Q9BY65 106 aa12.54□□□□□ -0.4
CXCL1P1-201ENST00000502804 SLC39A9Q9NUM3 307 aa12.54□□□□□ -0.4
CXCL1P1-201ENST00000502804 RPL7P18124 248 aaKnown RBP12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 MEOX2P50222 304 aa12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 B2MP61769 119 aa12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 TMEM37Q8WXS4 190 aa12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 PFDN5Q99471 154 aa12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 WDR61Q9GZS3 305 aaKnown RBP12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 DNAJC4Q9NNZ3 241 aa12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 PXMP4Q9Y6I8 212 aa12.53□□□□□ -0.4
CXCL1P1-201ENST00000502804 KIR2DL5BA0A0G2JN68 375 aa12.52□□□□□ -0.41
CXCL1P1-201ENST00000502804 KIR2DL5BA0A0G2JPC4 375 aa12.52□□□□□ -0.41
CXCL1P1-201ENST00000502804 STHQ8IWL8 128 aa12.52□□□□□ -0.41
CXCL1P1-201ENST00000502804 KIR2DL5AQ8N109 375 aa12.52□□□□□ -0.41
CXCL1P1-201ENST00000502804 ZNF709Q8N972 641 aa12.52□□□□□ -0.41
CXCL1P1-201ENST00000502804 KIR2DL5BQ8NHK3 375 aa12.52□□□□□ -0.41
CXCL1P1-201ENST00000502804 SMIM3Q9BZL3 60 aa12.52□□□□□ -0.41
CXCL1P1-201ENST00000502804 UBE2CO00762 179 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 ISLRO14498 428 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 SOCS3O14543 225 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 IFNA5P01569 189 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 ATF4P18848 351 aaPredicted RBP12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 PSMB3P49720 205 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 Q5BKY6 102 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 C16orf92Q96LL3 132 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 LINC00052Q96N35 136 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 KCNIP2Q9NS61 270 aa12.51□□□□□ -0.41
CXCL1P1-201ENST00000502804 KNCNA6PVL3 124 aa12.5□□□□□ -0.41
CXCL1P1-201ENST00000502804 C17orf112F2Z3M2 114 aa12.5□□□□□ -0.41
CXCL1P1-201ENST00000502804 ACTL10Q5JWF8 245 aa12.5□□□□□ -0.41
CXCL1P1-201ENST00000502804 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
CXCL1P1-201ENST00000502804 OR2T35Q8NGX2 323 aa12.5□□□□□ -0.41
CXCL1P1-201ENST00000502804 SCGB1C1Q8TD33 95 aa12.5□□□□□ -0.41
CXCL1P1-201ENST00000502804 CSTL1Q9H114 145 aa12.5□□□□□ -0.41
CXCL1P1-201ENST00000502804 RETNQ9HD89 108 aa12.5□□□□□ -0.41
CXCL1P1-201ENST00000502804 Q6ZWC4 215 aa12.49□□□□□ -0.41
CXCL1P1-201ENST00000502804 BPIFA4PQ86YQ2 179 aa12.49□□□□□ -0.41
CXCL1P1-201ENST00000502804 GATAD1Q8WUU5 269 aa12.49□□□□□ -0.41
CXCL1P1-201ENST00000502804 C17orf77Q96MU5 243 aa12.49□□□□□ -0.41
CXCL1P1-201ENST00000502804 AQP10Q96PS8 301 aa12.49□□□□□ -0.41
CXCL1P1-201ENST00000502804 COL7A1Q02388 2944 aa12.49□□□□□ -0.41
CXCL1P1-201ENST00000502804 MORN5Q5VZ52 161 aa12.48□□□□□ -0.41
CXCL1P1-201ENST00000502804 TRPT1Q86TN4 253 aaKnown RBP12.48□□□□□ -0.41
CXCL1P1-201ENST00000502804 INO80EQ8NBZ0 244 aaPredicted RBP12.48□□□□□ -0.41
CXCL1P1-201ENST00000502804 WWC2-AS2Q96NR7 200 aa12.48□□□□□ -0.41
CXCL1P1-201ENST00000502804 WFDC1Q9HC57 220 aa12.48□□□□□ -0.41
CXCL1P1-201ENST00000502804 DNAH9Q9NYC9 4486 aa12.47□□□□□ -0.41
CXCL1P1-201ENST00000502804 FXYD6-FXYD2A0A087WZ82 144 aa12.47□□□□□ -0.41
CXCL1P1-201ENST00000502804 A0A087X0K7 114 aa12.47□□□□□ -0.41
CXCL1P1-201ENST00000502804 MRPS12O15235 138 aaKnown RBP12.47□□□□□ -0.41
CXCL1P1-201ENST00000502804 LRRC20Q8TCA0 184 aa12.47□□□□□ -0.41
CXCL1P1-201ENST00000502804 PARD6GQ9BYG4 376 aaPredicted RBP12.47□□□□□ -0.41
CXCL1P1-201ENST00000502804 RPRMQ9NS64 109 aa12.47□□□□□ -0.41
CXCL1P1-201ENST00000502804 TRAV5A0A0B4J249 113 aa12.46□□□□□ -0.41
CXCL1P1-201ENST00000502804 SPRY2O43597 315 aa12.46□□□□□ -0.41
CXCL1P1-201ENST00000502804 DEFB135Q30KP9 77 aa12.46□□□□□ -0.41
CXCL1P1-201ENST00000502804 GCSAMLQ5JQS6 135 aa12.46□□□□□ -0.41
CXCL1P1-201ENST00000502804 MORN3Q6PF18 240 aaPredicted RBP12.46□□□□□ -0.41
CXCL1P1-201ENST00000502804 OVOL2Q9BRP0 275 aa12.46□□□□□ -0.41
CXCL1P1-201ENST00000502804 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.41
CXCL1P1-201ENST00000502804 TRAV8-2A0A0B4J237 113 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 H3BMM0 161 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 CA1P00915 261 aaPredicted RBP12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 SPP1P10451 314 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 ZNF266Q14584 549 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 FAM78BQ5VT40 261 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 FOXI2Q6ZQN5 318 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 RNF183Q96D59 192 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 C20orf173Q96LM9 149 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 SAV1Q9H4B6 383 aaPredicted RBP12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 TNFSF18Q9UNG2 199 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
CXCL1P1-201ENST00000502804 CXCL2P19875 107 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 DEFB1P60022 68 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 FFAR4Q5NUL3 377 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 GDF5OSQ5U4N7 250 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 SPATA31B1PQ5VZV4 182 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 IGFL4Q6B9Z1 124 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 EBLN2Q6P2I7 272 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 LCN15Q6UWW0 184 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 HRH4Q9H3N8 390 aa12.44□□□□□ -0.42
CXCL1P1-201ENST00000502804 RNF222A6NCQ9 220 aa12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 G3V3Q6 166 aa12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 SNRPCP09234 159 aaKnown RBP12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 IGLC2P0DOY2 106 aa12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 NUTF2P61970 127 aaKnown RBP12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 TMEM41BQ5BJD5 291 aa12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 RNF182Q8N6D2 247 aa12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 SLC50A1Q9BRV3 221 aa12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
CXCL1P1-201ENST00000502804 H3BQ15 152 aa12.42□□□□□ -0.42
CXCL1P1-201ENST00000502804 GUK1Q16774 197 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms