RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TRGV9Q99603 122 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 RAB26Q9ULW5 256 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 SMIM31A0A1B0GVY4 71 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 GAGE12BA1L429 117 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 GAGE7O76087 117 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 APOA1P02647 267 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 FABP1P07148 127 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 GAGE12FP0CL80 117 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 GAGE12GP0CL81 117 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 GAGE12IP0CL82 117 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 GCSHP23434 173 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 GPX4P36969 197 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-236ENST00000498808 HIST1H1AQ02539 215 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-236ENST00000498808 ZNF738Q8NE65 137 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 TERB2Q8NHR7 220 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 DTD1Q8TEA8 209 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 VCX3BQ9H321 246 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 NAA60Q9H7X0 242 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 COMMD3Q9UBI1 195 aa10.64□□□□□ -0.71
HDAC6-236ENST00000498808 DNAH8Q96JB1 4490 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 KRTAP29-1A8MX34 341 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-236ENST00000498808 GABARAPH6UMI1 98 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 ADAP1O75689 374 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 GABARAPO95166 117 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 PRB4P10163 310 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-236ENST00000498808 RHOBP62745 196 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 NEDD8Q15843 81 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 SCGB2B2Q4G0G5 96 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 OR8A1Q8NGG7 326 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 OR4D5Q8NGN0 318 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 OR1B1Q8NGR6 318 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 RTBDNQ9BSG5 229 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-236ENST00000498808 HSPB7Q9UBY9 170 aa10.63□□□□□ -0.71
HDAC6-236ENST00000498808 SULT1A3P0DMM9 295 aa10.62□□□□□ -0.71
HDAC6-236ENST00000498808 SULT1A4P0DMN0 295 aa10.62□□□□□ -0.71
HDAC6-236ENST00000498808 FGL1Q08830 312 aa10.62□□□□□ -0.71
HDAC6-236ENST00000498808 THAP8Q8NA92 274 aa10.62□□□□□ -0.71
HDAC6-236ENST00000498808 TMPRSS5Q9H3S3 457 aa10.62□□□□□ -0.71
HDAC6-236ENST00000498808 RBKSQ9H477 322 aa10.62□□□□□ -0.71
HDAC6-236ENST00000498808 SLC45A2Q9UMX9 530 aa10.62□□□□□ -0.71
HDAC6-236ENST00000498808 H7BYZ3 331 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 NXPH4O95158 308 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 TNFAIP8O95379 198 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 RLN2P04090 185 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 CDKN1BP46527 198 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 LSM3P62310 102 aaKnown RBP10.61□□□□□ -0.71
HDAC6-236ENST00000498808 KIR3DS1Q14943 382 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 OR52I2Q8NH67 350 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 GPR82Q96P67 336 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 CACFD1Q9UGQ2 172 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 TMEM56-RWDD3S4R434 201 aa10.61□□□□□ -0.71
HDAC6-236ENST00000498808 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
HDAC6-236ENST00000498808 TBPP20226 339 aa10.6□□□□□ -0.71
HDAC6-236ENST00000498808 GATA2P23769 480 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-236ENST00000498808 SERTAD4-AS1Q5TG53 156 aa10.6□□□□□ -0.71
HDAC6-236ENST00000498808 TMEM182Q6ZP80 229 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-236ENST00000498808 TMED4Q7Z7H5 227 aa10.6□□□□□ -0.71
HDAC6-236ENST00000498808 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
HDAC6-236ENST00000498808 PPP1R14DQ9NXH3 145 aa10.6□□□□□ -0.71
HDAC6-236ENST00000498808 PRR13Q9NZ81 148 aa10.6□□□□□ -0.71
HDAC6-236ENST00000498808 MTFP1Q9UDX5 166 aa10.6□□□□□ -0.71
HDAC6-236ENST00000498808 C14orf166Q9Y224 244 aaKnown RBP10.6□□□□□ -0.71
HDAC6-236ENST00000498808 CRYM-AS1A6NIL9 109 aa10.59□□□□□ -0.71
HDAC6-236ENST00000498808 HPGDSO60760 199 aa10.59□□□□□ -0.71
HDAC6-236ENST00000498808 CFDP00746 253 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-236ENST00000498808 ORM2P19652 201 aa10.59□□□□□ -0.71
HDAC6-236ENST00000498808 CXCL3P19876 107 aa10.59□□□□□ -0.71
HDAC6-236ENST00000498808 ATP5IP56385 69 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-236ENST00000498808 GGNBP1Q5YKI7 109 aa10.59□□□□□ -0.71
HDAC6-236ENST00000498808 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
HDAC6-236ENST00000498808 RAB3DO95716 219 aa10.58□□□□□ -0.72
HDAC6-236ENST00000498808 GPR107Q5VW38 600 aa10.58□□□□□ -0.72
HDAC6-236ENST00000498808 FAAP20Q6NZ36 180 aa10.58□□□□□ -0.72
HDAC6-236ENST00000498808 Q6ZTI0 123 aa10.58□□□□□ -0.72
HDAC6-236ENST00000498808 SNURFLB1AK76 121 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 H3BRN7 92 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 CCR6P51684 374 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 SMCO1Q147U7 214 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 PSG3Q16557 428 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 CCDC28AQ8IWP9 274 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 TMEM229BQ8NBD8 167 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 SYT8Q8NBV8 401 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 IL22RA2Q969J5 263 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 TMEM147Q9BVK8 224 aa10.57□□□□□ -0.72
HDAC6-236ENST00000498808 PARD6GQ9BYG4 376 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-236ENST00000498808 TAS2R19P59542 299 aa10.56□□□□□ -0.72
HDAC6-236ENST00000498808 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
HDAC6-236ENST00000498808 STEAP1BQ6NZ63 245 aa10.56□□□□□ -0.72
HDAC6-236ENST00000498808 BPIFCQ8NFQ6 507 aa10.56□□□□□ -0.72
HDAC6-236ENST00000498808 FAM30AQ9NZY2 134 aa10.56□□□□□ -0.72
HDAC6-236ENST00000498808 GPR132Q9UNW8 380 aa10.56□□□□□ -0.72
HDAC6-236ENST00000498808 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
HDAC6-236ENST00000498808 SURF2Q15527 256 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-236ENST00000498808 LYZL2Q7Z4W2 148 aa10.55□□□□□ -0.72
HDAC6-236ENST00000498808 RPUSD4Q96CM3 377 aaKnown RBP10.55□□□□□ -0.72
HDAC6-236ENST00000498808 YIPF6Q96EC8 236 aa10.55□□□□□ -0.72
HDAC6-236ENST00000498808 SHANK2-AS3Q9BTD1 123 aa10.55□□□□□ -0.72
HDAC6-236ENST00000498808 A0A087X0K7 114 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms