RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 MORN5Q5VZ52 161 aa14.41□□□□□ -0.1
HDAC4-212ENST00000495497 LINC00322Q6ZN03 302 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-212ENST00000495497 RSG1Q9BU20 258 aa14.41□□□□□ -0.1
HDAC4-212ENST00000495497 DNAJC4Q9NNZ3 241 aa14.41□□□□□ -0.1
HDAC4-212ENST00000495497 RFNGQ9Y644 331 aa14.41□□□□□ -0.1
HDAC4-212ENST00000495497 RNF222A6NCQ9 220 aa14.4□□□□□ -0.1
HDAC4-212ENST00000495497 IFNA5P01569 189 aa14.4□□□□□ -0.1
HDAC4-212ENST00000495497 S100A7P31151 101 aa14.4□□□□□ -0.1
HDAC4-212ENST00000495497 GALR1P47211 349 aa14.4□□□□□ -0.1
HDAC4-212ENST00000495497 CMC4P56277 68 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-212ENST00000495497 HAGHQ16775 308 aa14.4□□□□□ -0.1
HDAC4-212ENST00000495497 FAM110AQ9BQ89 295 aa14.4□□□□□ -0.1
HDAC4-212ENST00000495497 TNFSF18Q9UNG2 199 aa14.4□□□□□ -0.1
HDAC4-212ENST00000495497 ELOA3CA0A087WX78 387 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-212ENST00000495497 TRAV5A0A0B4J249 113 aa14.39□□□□□ -0.11
HDAC4-212ENST00000495497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.39□□□□□ -0.11
HDAC4-212ENST00000495497 ZNF709Q8N972 641 aa14.39□□□□□ -0.11
HDAC4-212ENST00000495497 INO80EQ8NBZ0 244 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-212ENST00000495497 OR1L4Q8NGR5 311 aa14.39□□□□□ -0.11
HDAC4-212ENST00000495497 SCGB1C1Q8TD33 95 aa14.39□□□□□ -0.11
HDAC4-212ENST00000495497 hCG_2014768A0A024R1R8 64 aa14.38□□□□□ -0.11
HDAC4-212ENST00000495497 SNRPCP09234 159 aaKnown RBP14.38□□□□□ -0.11
HDAC4-212ENST00000495497 RPL35AP18077 110 aaKnown RBP14.38□□□□□ -0.11
HDAC4-212ENST00000495497 PSMG4Q5JS54 123 aa14.38□□□□□ -0.11
HDAC4-212ENST00000495497 GPR82Q96P67 336 aa14.38□□□□□ -0.11
HDAC4-212ENST00000495497 C17orf112F2Z3M2 114 aa14.37□□□□□ -0.11
HDAC4-212ENST00000495497 SOCS3O14543 225 aa14.37□□□□□ -0.11
HDAC4-212ENST00000495497 S100A7AQ86SG5 101 aa14.37□□□□□ -0.11
HDAC4-212ENST00000495497 PFDN5Q99471 154 aa14.37□□□□□ -0.11
HDAC4-212ENST00000495497 LOC102724200A0A096LPH7 203 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-212ENST00000495497 KNCNA6PVL3 124 aa14.36□□□□□ -0.11
HDAC4-212ENST00000495497 MRPS12O15235 138 aaKnown RBP14.36□□□□□ -0.11
HDAC4-212ENST00000495497 ARPC5O15511 151 aa14.36□□□□□ -0.11
HDAC4-212ENST00000495497 RPL7P18124 248 aaKnown RBP14.36□□□□□ -0.11
HDAC4-212ENST00000495497 ATF4P18848 351 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-212ENST00000495497 DEFB1P60022 68 aa14.36□□□□□ -0.11
HDAC4-212ENST00000495497 SPATA31B1PQ5VZV4 182 aa14.36□□□□□ -0.11
HDAC4-212ENST00000495497 IGFL4Q6B9Z1 124 aa14.36□□□□□ -0.11
HDAC4-212ENST00000495497 LINC00052Q96N35 136 aa14.36□□□□□ -0.11
HDAC4-212ENST00000495497 PARD6GQ9BYG4 376 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-212ENST00000495497 SNRPD3P62318 126 aaKnown RBP14.35□□□□□ -0.11
HDAC4-212ENST00000495497 FFAR4Q5NUL3 377 aa14.35□□□□□ -0.11
HDAC4-212ENST00000495497 OR11H4Q8NGC9 324 aa14.35□□□□□ -0.11
HDAC4-212ENST00000495497 GATAD1Q8WUU5 269 aa14.35□□□□□ -0.11
HDAC4-212ENST00000495497 C16orf92Q96LL3 132 aa14.35□□□□□ -0.11
HDAC4-212ENST00000495497 TGP01266 2768 aa14.34□□□□□ -0.11
HDAC4-212ENST00000495497 H3BTX0 84 aa14.34□□□□□ -0.11
HDAC4-212ENST00000495497 NHLRC4P0CG21 123 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-212ENST00000495497 FAM78BQ5VT40 261 aa14.34□□□□□ -0.11
HDAC4-212ENST00000495497 HSD17B11Q8NBQ5 300 aa14.34□□□□□ -0.11
HDAC4-212ENST00000495497 ST6GAL2Q96JF0 529 aa14.34□□□□□ -0.11
HDAC4-212ENST00000495497 C20orf173Q96LM9 149 aa14.34□□□□□ -0.11
HDAC4-212ENST00000495497 SEPSECSQ9HD40 501 aaKnown RBP14.34□□□□□ -0.11
HDAC4-212ENST00000495497 RETNQ9HD89 108 aa14.34□□□□□ -0.11
HDAC4-212ENST00000495497 KCNIP2Q9NS61 270 aa14.34□□□□□ -0.11
HDAC4-212ENST00000495497 TRAV8-2A0A0B4J237 113 aa14.33□□□□□ -0.12
HDAC4-212ENST00000495497 ID1P41134 155 aa14.33□□□□□ -0.12
HDAC4-212ENST00000495497 MEOX2P50222 304 aa14.33□□□□□ -0.12
HDAC4-212ENST00000495497 ZNF266Q14584 549 aa14.33□□□□□ -0.12
HDAC4-212ENST00000495497 RPL7L1Q6DKI1 246 aaKnown RBP14.33□□□□□ -0.12
HDAC4-212ENST00000495497 MIR17HGQ75NE6 70 aa14.33□□□□□ -0.12
HDAC4-212ENST00000495497 BPIFA4PQ86YQ2 179 aa14.33□□□□□ -0.12
HDAC4-212ENST00000495497 TM2D3Q9BRN9 247 aa14.33□□□□□ -0.12
HDAC4-212ENST00000495497 MFFQ9GZY8 342 aa14.33□□□□□ -0.12
HDAC4-212ENST00000495497 A0A087X0K7 114 aa14.32□□□□□ -0.12
HDAC4-212ENST00000495497 A0A1B0GVG6 124 aa14.32□□□□□ -0.12
HDAC4-212ENST00000495497 ISLRO14498 428 aa14.32□□□□□ -0.12
HDAC4-212ENST00000495497 PSMB3P49720 205 aa14.32□□□□□ -0.12
HDAC4-212ENST00000495497 ACTL10Q5JWF8 245 aa14.32□□□□□ -0.12
HDAC4-212ENST00000495497 RNF24Q9Y225 148 aa14.32□□□□□ -0.12
HDAC4-212ENST00000495497 H3BQ15 152 aa14.31□□□□□ -0.12
HDAC4-212ENST00000495497 EIF3GO75821 320 aaKnown RBP eCLIP14.31□□□□□ -0.12
HDAC4-212ENST00000495497 PRB4P10163 310 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-212ENST00000495497 HLA-DMBP28068 263 aa14.31□□□□□ -0.12
HDAC4-212ENST00000495497 STHQ8IWL8 128 aa14.31□□□□□ -0.12
HDAC4-212ENST00000495497 RNF182Q8N6D2 247 aa14.31□□□□□ -0.12
HDAC4-212ENST00000495497 SLC25A2Q9BXI2 301 aa14.31□□□□□ -0.12
HDAC4-212ENST00000495497 ZMAT4Q9H898 229 aa14.31□□□□□ -0.12
HDAC4-212ENST00000495497 IGLC2P0DOY2 106 aa14.3□□□□□ -0.12
HDAC4-212ENST00000495497 ATP6V0CP27449 155 aa14.3□□□□□ -0.12
HDAC4-212ENST00000495497 GDF5OSQ5U4N7 250 aa14.3□□□□□ -0.12
HDAC4-212ENST00000495497 LRRC20Q8TCA0 184 aa14.3□□□□□ -0.12
HDAC4-212ENST00000495497 TIMM9Q9Y5J7 89 aa14.3□□□□□ -0.12
HDAC4-212ENST00000495497 COL7A1Q02388 2944 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 F6UB75 175 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 SLC17A3O00476 420 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 PYYP10082 97 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 APOC4P55056 127 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 RAB2AP61019 212 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 TRPT1Q86TN4 253 aaKnown RBP14.29□□□□□ -0.12
HDAC4-212ENST00000495497 FAM167A-AS1Q96KT0 104 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 SPATA25Q9BR10 227 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 SH3BGRL3Q9H299 93 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 CYTL1Q9NRR1 136 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 ZNF586Q9NXT0 402 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 FUT9Q9Y231 359 aa14.29□□□□□ -0.12
HDAC4-212ENST00000495497 BORCS7-ASMTA0A0B4J1R7 106 aa14.28□□□□□ -0.12
HDAC4-212ENST00000495497 HMSDA8MTL9 139 aa14.28□□□□□ -0.12
HDAC4-212ENST00000495497 CXCL2P19875 107 aa14.28□□□□□ -0.12
HDAC4-212ENST00000495497 SAMD13Q5VXD3 122 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms