RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 PFDN2Q9UHV9 154 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 RNF222A6NCQ9 220 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 K7EQG2 157 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 NUP62P37198 522 aaPredicted RBP8.26□□□□□ -1.09
APTX-230ENST00000494649 INO80EQ8NBZ0 244 aaPredicted RBP8.26□□□□□ -1.09
APTX-230ENST00000494649 LINC00052Q96N35 136 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 B9D2Q9BPU9 175 aa8.26□□□□□ -1.09
APTX-230ENST00000494649 KNCNA6PVL3 124 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 IFNA5P01569 189 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 CD5P06127 495 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 RPL29P47914 159 aaKnown RBP8.25□□□□□ -1.09
APTX-230ENST00000494649 PLP1P60201 277 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 ZNF709Q8N972 641 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 HSD17B11Q8NBQ5 300 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 OR11H4Q8NGC9 324 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 SCGB1C1Q8TD33 95 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 AQP10Q96PS8 301 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 RETNQ9HD89 108 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 TNFSF18Q9UNG2 199 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 SPATA31B1PQ5VZV4 182 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 C17orf77Q96MU5 243 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 DNAJC4Q9NNZ3 241 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 DNAH9Q9NYC9 4486 aa8.25□□□□□ -1.09
APTX-230ENST00000494649 NBEAL2Q6ZNJ1 2754 aa8.24□□□□□ -1.09
APTX-230ENST00000494649 MPDU1O75352 247 aa8.24□□□□□ -1.09
APTX-230ENST00000494649 GALR1P47211 349 aa8.24□□□□□ -1.09
APTX-230ENST00000494649 HAGHQ16775 308 aa8.24□□□□□ -1.09
APTX-230ENST00000494649 C1orf194Q5T5A4 169 aa8.24□□□□□ -1.09
APTX-230ENST00000494649 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
APTX-230ENST00000494649 ASB13Q8WXK3 278 aa8.24□□□□□ -1.09
APTX-230ENST00000494649 SEPSECSQ9HD40 501 aaKnown RBP8.24□□□□□ -1.09
APTX-230ENST00000494649 ATF4P18848 351 aaPredicted RBP8.23□□□□□ -1.09
APTX-230ENST00000494649 CD300CQ08708 224 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 ACTL10Q5JWF8 245 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 FFAR4Q5NUL3 377 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 FAM78BQ5VT40 261 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 FAM110AQ9BQ89 295 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 AGRNO00468 2067 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 ELOA3CA0A087WX78 387 aaPredicted RBP8.23□□□□□ -1.09
APTX-230ENST00000494649 C17orf112F2Z3M2 114 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 F6UB75 175 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 IGKV3-20P01619 116 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 HLA-DMBP28068 263 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 RPL7L1Q6DKI1 246 aaKnown RBP8.23□□□□□ -1.09
APTX-230ENST00000494649 MIR17HGQ75NE6 70 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 OR1L4Q8NGR5 311 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 ST6GAL2Q96JF0 529 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 MFFQ9GZY8 342 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 SH3BGRL3Q9H299 93 aa8.23□□□□□ -1.09
APTX-230ENST00000494649 LOC102724200A0A096LPH7 203 aaPredicted RBP8.22□□□□□ -1.09
APTX-230ENST00000494649 PYYP10082 97 aa8.22□□□□□ -1.09
APTX-230ENST00000494649 RPL7P18124 248 aaKnown RBP8.22□□□□□ -1.09
APTX-230ENST00000494649 SNRPD3P62318 126 aaKnown RBP8.22□□□□□ -1.09
APTX-230ENST00000494649 GDF5OSQ5U4N7 250 aa8.22□□□□□ -1.09
APTX-230ENST00000494649 C20orf173Q96LM9 149 aa8.22□□□□□ -1.09
APTX-230ENST00000494649 PFDN5Q99471 154 aa8.22□□□□□ -1.09
APTX-230ENST00000494649 SOCS3O14543 225 aa8.22□□□□□ -1.09
APTX-230ENST00000494649 HMGB3O15347 200 aaKnown RBP8.22□□□□□ -1.09
APTX-230ENST00000494649 PXDC1Q5TGL8 231 aa8.22□□□□□ -1.09
APTX-230ENST00000494649 LRRC20Q8TCA0 184 aa8.22□□□□□ -1.09
APTX-230ENST00000494649 TRAV2A0A0B4J234 112 aa8.21□□□□□ -1.1
APTX-230ENST00000494649 A8MZ25 164 aa8.21□□□□□ -1.1
APTX-230ENST00000494649 H3BQ15 152 aa8.21□□□□□ -1.1
APTX-230ENST00000494649 SLC17A3O00476 420 aa8.21□□□□□ -1.1
APTX-230ENST00000494649 ZNF705DP0CH99 300 aaPredicted RBP8.21□□□□□ -1.1
APTX-230ENST00000494649 ZNF705BP0CI00 300 aaPredicted RBP8.21□□□□□ -1.1
APTX-230ENST00000494649 ZNF266Q14584 549 aa8.21□□□□□ -1.1
APTX-230ENST00000494649 LINC00322Q6ZN03 302 aaPredicted RBP8.21□□□□□ -1.1
APTX-230ENST00000494649 BPIFA4PQ86YQ2 179 aa8.21□□□□□ -1.1
APTX-230ENST00000494649 STHQ8IWL8 128 aa8.21□□□□□ -1.1
APTX-230ENST00000494649 HUWE1Q7Z6Z7 4374 aaKnown RBP8.21□□□□□ -1.1
APTX-230ENST00000494649 TENM3Q9P273 2699 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 TRAV8-2A0A0B4J237 113 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 MRPS12O15235 138 aaKnown RBP8.2□□□□□ -1.1
APTX-230ENST00000494649 OR10J4P0C629 311 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 ATP6V0CP27449 155 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 S100A7P31151 101 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 RAB2AP61019 212 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 GATAD1Q8WUU5 269 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 BLNKQ8WV28 456 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 SLC25A2Q9BXI2 301 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 CXCL2P19875 107 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 DEFB135Q30KP9 77 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 GPR82Q96P67 336 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 KCNIP2Q9NS61 270 aa8.2□□□□□ -1.1
APTX-230ENST00000494649 ID1P41134 155 aa8.19□□□□□ -1.1
APTX-230ENST00000494649 FXYD7P58549 80 aa8.19□□□□□ -1.1
APTX-230ENST00000494649 FAM122CQ6P4D5 195 aa8.19□□□□□ -1.1
APTX-230ENST00000494649 AKAP14Q86UN6 197 aa8.19□□□□□ -1.1
APTX-230ENST00000494649 OR4B1Q8NGF8 309 aa8.19□□□□□ -1.1
APTX-230ENST00000494649 ZNF586Q9NXT0 402 aa8.19□□□□□ -1.1
APTX-230ENST00000494649 ZNF705FA8MVS1 300 aaPredicted RBP8.18□□□□□ -1.1
APTX-230ENST00000494649 ISLRO14498 428 aa8.18□□□□□ -1.1
APTX-230ENST00000494649 OR7C2O60412 319 aa8.18□□□□□ -1.1
APTX-230ENST00000494649 IGLC2P0DOY2 106 aa8.18□□□□□ -1.1
APTX-230ENST00000494649 PSMB3P49720 205 aa8.18□□□□□ -1.1
APTX-230ENST00000494649 RCHY1Q96PM5 261 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms