RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CKLFQ9UBR5 152 aa1.09□□□□□ -2.23
LMNB1-207ENST00000494185 BAIAP2Q9UQB8 552 aa1.09□□□□□ -2.23
LMNB1-207ENST00000494185 HIGD1AQ9Y241 93 aa1.09□□□□□ -2.23
LMNB1-207ENST00000494185 MED14O60244 1454 aa1.09□□□□□ -2.24
LMNB1-207ENST00000494185 A2MP01023 1474 aa1.09□□□□□ -2.24
LMNB1-207ENST00000494185 MAGI1Q96QZ7 1491 aaPredicted RBP1.09□□□□□ -2.24
LMNB1-207ENST00000494185 SCAF11Q99590 1463 aaKnown RBP1.09□□□□□ -2.24
LMNB1-207ENST00000494185 CECR2Q9BXF3 1484 aa1.09□□□□□ -2.24
LMNB1-207ENST00000494185 CACNA1SQ13698 1873 aa1.09□□□□□ -2.24
LMNB1-207ENST00000494185 DOCK5Q9H7D0 1870 aa1.09□□□□□ -2.24
LMNB1-207ENST00000494185 ANKRD36BQ8N2N9 1353 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 DOCK6Q96HP0 2047 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 COL5A1P20908 1838 aaPredicted RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 RIC1Q4ADV7 1423 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 CD109Q6YHK3 1445 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 MBD5Q9P267 1494 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 RAPGEF2Q9Y4G8 1499 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 IGLV3-9A0A075B6K5 115 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 TMSB15BA0A087X1C1 80 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 BORCS7-ASMTA0A0B4J1R7 106 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 IGKV1-9A0A0C4DH69 117 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 C7orf71A4D174 169 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 ARRDC5A6NEK1 342 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 IFITM5A6NNB3 132 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 E7EQ34 232 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 FNDC10F2Z333 226 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 C3orf84H3BNL1 204 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 CCDC179H3BU77 68 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 M0R378 163 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 TAX1BP3O14907 124 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 NAPSAO96009 420 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 SCTP09683 121 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 IGLC6P0CF74 106 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 FKBP2P26885 142 aaKnown RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 RNASE4P34096 147 aaKnown RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 SRP14P37108 136 aaKnown RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 HINT1P49773 126 aaPredicted RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 DEFA3P59666 94 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 TMEM258P61165 79 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 EIF5AP63241 154 aaKnown RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 MRPS10P82664 201 aaKnown RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 TDRG1Q3Y452 100 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 CLLU1Q5K131 121 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 FAM74A1Q5RGS3 127 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 COL5A1-AS1Q5SY13 56 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 TMEM244Q5VVB8 128 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 GLIPR1L1Q6UWM5 242 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 DPPA3Q6W0C5 159 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 GKN2Q86XP6 184 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 KRTAP13-1Q8IUC0 172 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 CTAGE3PQ8IX95 158 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 C8orf59Q8N0T1 100 aaPredicted RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 MMGT1Q8N4V1 131 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 OR8B3Q8NGG8 313 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 WFDC5Q8TCV5 224 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 ARL11Q969Q4 196 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 HIST1H2BLQ99880 126 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 GINS4Q9BRT9 223 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 OR2J1Q9GZK6 312 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 TRAPPC2LQ9UL33 140 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 BOKQ9UMX3 212 aaPredicted RBP1.08□□□□□ -2.24
LMNB1-207ENST00000494185 KIF13BQ9NQT8 1826 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 MED23Q9ULK4 1368 aa1.08□□□□□ -2.24
LMNB1-207ENST00000494185 HECW1Q76N89 1606 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 BCL9O00512 1426 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 CPSF1Q10570 1443 aaKnown RBP1.07□□□□□ -2.24
LMNB1-207ENST00000494185 ARHGAP31Q2M1Z3 1444 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 TNS3Q68CZ2 1445 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 SCAPERQ9BY12 1400 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 RIMS1Q86UR5 1692 aaKnown RBP1.07□□□□□ -2.24
LMNB1-207ENST00000494185 TRPM6Q9BX84 2022 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 ERICH3Q5RHP9 1530 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 KDM5DQ9BY66 1539 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 TRGV10A0A0A0MS01 117 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 TRGV4A0A0C4DH28 118 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 A0A0G2JQZ4 141 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 HMSDA8MTL9 139 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 ZNF705FA8MVS1 300 aaPredicted RBP1.07□□□□□ -2.24
LMNB1-207ENST00000494185 C1orf196B1AJZ1 125 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 J3KT08 172 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 J3QKU1 62 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 M0R2Z0 102 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 OVOL1O14753 267 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 MT-ND4LP03901 98 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 DBIP07108 87 aaKnown RBP1.07□□□□□ -2.24
LMNB1-207ENST00000494185 HLA-EP13747 358 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 CMPK1P30085 196 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 PEBP1P30086 187 aaKnown RBP1.07□□□□□ -2.24
LMNB1-207ENST00000494185 NDUFA6P56556 154 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 HSD52Q0P140 79 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 BCL2L15Q5TBC7 163 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 C22orf39Q6P5X5 142 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 LCN15Q6UWW0 184 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 TMEM14EPQ6UXP3 125 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 Q6ZQT0 140 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 TCTE3Q8IZS6 198 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 LINC00471Q8N535 108 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 C5orf17Q8NAS9 161 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 STAG3L4Q8TBR4 150 aa1.07□□□□□ -2.24
LMNB1-207ENST00000494185 ZCCHC13Q8WW36 166 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms