RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 Q86TA4 180 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 NIT1Q86X76 327 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 CIARTQ8N365 385 aaPredicted RBP9.18□□□□□ -0.94
RFC4-214ENST00000494047 OR2D3Q8NGH3 330 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 TIMD4Q96H15 378 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 THYN1Q9P016 225 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 CTSZQ9UBR2 303 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 TRAV5A0A0B4J249 113 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 A0A1B0GUS0 222 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 IGLC1P0CG04 106 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 COL8A1P27658 744 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 RAB9AP51151 201 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 PET117Q6UWS5 81 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 SRSF12Q8WXF0 261 aaKnown RBP9.17□□□□□ -0.94
RFC4-214ENST00000494047 WFIKKN1Q96NZ8 548 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 CADP27708 2225 aa9.17□□□□□ -0.94
RFC4-214ENST00000494047 CENPEQ02224 2701 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.16□□□□□ -0.94
RFC4-214ENST00000494047 CT45A10P0DMU9 189 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 NTF3P20783 257 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 GPR6P46095 362 aaPredicted RBP9.16□□□□□ -0.94
RFC4-214ENST00000494047 PSG9Q00887 426 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 PRR27Q6MZM9 219 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 Q6ZN92 141 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 SPOCK3Q9BQ16 436 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 PMCHL2Q9BQD1 86 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 SHANK2-AS3Q9BTD1 123 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 SLC25A39Q9BZJ4 359 aaPredicted RBP9.16□□□□□ -0.94
RFC4-214ENST00000494047 AAMDCQ9H7C9 122 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 GOLT1BQ9Y3E0 138 aa9.16□□□□□ -0.94
RFC4-214ENST00000494047 UTP20O75691 2785 aaKnown RBP9.16□□□□□ -0.94
RFC4-214ENST00000494047 PPIAL4CA0A0B4J2A2 164 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 A0A1B0GUT8 65 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 TEX22C9J3V5 150 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 E7EUB6 86 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 H3BRN7 92 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 MOSP00540 346 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 HLA-DRB1P01911 266 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 PPIAL4GP0DN37 164 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 COX6B1P14854 86 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 CSN1S1P47710 185 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
RFC4-214ENST00000494047 MLANAQ16655 118 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 MORN5Q5VZ52 161 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 RNASEKQ6P5S7 137 aaKnown RBP9.15□□□□□ -0.94
RFC4-214ENST00000494047 C16orf54Q6UWD8 224 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 C1orf122Q6ZSJ8 110 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 KIR3DL3Q8N743 410 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 Q8N976 141 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 NPBQ8NG41 125 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 OR11H6Q8NGC7 330 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 BLNKQ8WV28 456 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 RCHY1Q96PM5 261 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 MAP1LC3CQ9BXW4 147 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 MS4A6AQ9H2W1 248 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 DCAF16Q9NXF7 216 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 LAMTOR2Q9Y2Q5 125 aa9.15□□□□□ -0.94
RFC4-214ENST00000494047 NPIPB5A8MRT5 1133 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 E7EQL1 145 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 I3L2K1 104 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 NBR2O15453 112 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 SPINK4O60575 86 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 NDUFA3O95167 84 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 ZNF25P17030 456 aaPredicted RBP9.14□□□□□ -0.95
RFC4-214ENST00000494047 HTR1DP28221 377 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 LYZP61626 148 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 SLC35B1P78383 322 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 MRGPRG-AS1Q2M3A8 158 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 KIAA1644Q3SXP7 199 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 C10orf55Q5SWW7 151 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 LYPD2Q6UXB3 125 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 ORAOV1Q8WV07 137 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 NEU4Q8WWR8 484 aaPredicted RBP9.14□□□□□ -0.95
RFC4-214ENST00000494047 DPF1Q92782 380 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 SSBP3Q9BWW4 388 aaPredicted RBP9.14□□□□□ -0.95
RFC4-214ENST00000494047 LPAR2Q9HBW0 351 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 DPM3Q9P2X0 92 aa9.14□□□□□ -0.95
RFC4-214ENST00000494047 TRBV19A0A075B6N1 114 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 LOC102724200A0A096LPH7 203 aaPredicted RBP9.13□□□□□ -0.95
RFC4-214ENST00000494047 F2Z2F3 143 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 LEPROTL1O95214 131 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 CNIH1O95406 144 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 PSG1P11464 419 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 FCGR2BP31994 310 aaPredicted RBP9.13□□□□□ -0.95
RFC4-214ENST00000494047 CAMPP49913 170 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 SRSF2Q01130 221 aaKnown RBP9.13□□□□□ -0.95
RFC4-214ENST00000494047 SAPCD1Q5SSQ6 148 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 HCP5Q6MZN7 132 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 COX8CQ7Z4L0 72 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 MUC15Q8N387 334 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 C11orf42Q8N5U0 333 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 LY6G5BQ8NDX9 201 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 ZNRD1Q9P1U0 126 aa9.13□□□□□ -0.95
RFC4-214ENST00000494047 TRAV34A0A0B4J273 112 aa9.12□□□□□ -0.95
RFC4-214ENST00000494047 LY6LH3BQJ8 138 aa9.12□□□□□ -0.95
RFC4-214ENST00000494047 RPL7P18124 248 aaKnown RBP9.12□□□□□ -0.95
RFC4-214ENST00000494047 GRNP28799 593 aaKnown RBP9.12□□□□□ -0.95
RFC4-214ENST00000494047 TSPOP30536 169 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms